Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02709 ATGATAAGTGCAAAGAGGCTCATTGAAATGGCAAGAAAGTGGCAGAAAATGGCTGCGGGAAAACGCAAGAGAATTTCATACCCAAGGCACCATAATCTTCATTCTTCAGCACCAAACAAGGGTCACTTCGTCGTTTATAGCGTCGATCATAAGCGATTCGTGGTTCCCTTGAAGTACCTCACCACCAACGTCTTCAAAGAGCTTCTGAATTGGTCTGAAGAGGAGTTCGGTTTACCATCTAATGGACCCATTACGTTGCCTTGTGATAGCATCTTCTTGGAGTACGTAATCTCGTTGATTCGGGAACACGTTCCCGAAGAGGTTGAGAAGGCTTTGATCACTTCAATGGTTACGTGTCACCACTTGGCATCATCATCATCATCTTCTTCTTCTTCTTCGCGTATGATTATTTATGGCTTCTGA 423 0.4397 MISAKRLIEMARKWQKMAAGKRKRISYPRHHNLHSSAPNKGHFVVYSVDHKRFVVPLKYLTTNVFKELLNWSEEEFGLPSNGPITLPCDSIFLEYVISLIREHVPEEVEKALITSMVTCHHLASSSSSSSSSSRMIIYGF 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02709 140 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 1 125 IPR003676 GO:0009733
Viun11g02709 140 Pfam Auxin responsive protein 12 100 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02709 Viun-Chr11 39725309 39725917 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02709 3 100 Calmodulin-binding Proteins AT4G34750 31.313 3.50e-11 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02709 - - gmx:100802572 203.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g02709 11 39725309 39725917 Viun11g02709 11 39725309 39725917 ECH