Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02708 ATGGCTTGGAAGTTGCAGAAAGAGATCACTAATTACCAAAGGAAGAGACTTCTGTGGCCGAAGACTCATGAAAATGCAGCATCAGCAGAAGGTTGCAGCGTGTGGACGAAGGCTGAAAAGGGTCACTTTGTTGTTTACAGCATTGATAAGAAGCGCTTCGTGCTTCCCTTACTGTATCTGAAAAACAAGATTTTCAGAGAGCTTTTCAAGTTGGCAGAAGAAGAGTTTGGTCTTTGTAGCAACGTGCCTTTAACGTTGCCTTGTGAAGGGGCGTTAATAGAGTACGTGATAACGTTGATCCAGAGAAACGTGACTAAGGATGTGGAAGAAGCTGTGTTGATGTTCATAGCTACCGTTCGATGCCAATCGTCCTTTGATCTTCATCGTGAACCCACCAACCAACACTTGCTTTGCAGCTACTGA 423 0.4444 MAWKLQKEITNYQRKRLLWPKTHENAASAEGCSVWTKAEKGHFVVYSIDKKRFVLPLLYLKNKIFRELFKLAEEEFGLCSNVPLTLPCEGALIEYVITLIQRNVTKDVEEAVLMFIATVRCQSSFDLHREPTNQHLLCSY 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02708 140 Pfam Auxin responsive protein 13 100 IPR003676 GO:0009733
Viun11g02708 140 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 1 133 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02708 Viun-Chr11 39723590 39724012 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02708 41 102 Calmodulin-binding Proteins AT4G34750 36.508 4.05e-09 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02708 - - gmx:100803097 212.231