Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02700 ATGAACGACCAATTTTCAATGCCCGTTAATGGTGGTGGTGGTGACACAAAGCCTAGGGGTCTGGTTCATGACAAGTTTTCAGACTCCAAATTTCTTACCTTCATCGGTGCCCATGAAATTTTCACAGTGGAGACGTGGAAAGCAGCTTTGGTAGAGTTAATTGCAACTGGTGCACTAATGTTCACTCTAACCAGTTGCACTGTTGCATGTTTGGAATCACACGAGTCCAATCCCAAGCTTCTTATTCCCTTTGCAGTGTTCATCATAGTGTTCGTGTTTTTAATTGTGATAGTTCCTCTATCCGGGGGTCATATGAACCCTATTTTCACATTCGTCGCTGCTCTAAAGGGTATTGTCACCCTTTCTCGTGCTGTCCTTTACGTCGTAGCACAGTGCATTGGCTCAACAATTGGTTTCTTTGTACTGAAGAGTGTGATGGAGCCAGAATTAGCACAAACATATTCATTGGGAGGTTGTGCAATTGGTGACAAAGGACAAGGTTCTTCGATAAAGCCGCATGATGCTTTGTTGTTGGAATTCTCTTGCACACTTCTGGTACTCTTTGTTGGTATCACGCTCGCATTTGATAAGAAAAGGTGCAAGGAATTGGGCTTTCCAATGGTGTGTCTCGTGGTAGCAGCATCCCTCGCACTCGCAGTTTTTCTGTCCTTAACGGTAACAGGGAGGCCCGGTTATGCAGGCGCGGGCCTGAACCCGGCAAGATGTTTGGGCTCGGCGTTACTTCACGGAGGCCCACTATGGAATGGGCATTGGATTTTCTGGGCCGGGCCTTTCTTGGCCTGCATAATCTATTACAGTGTCTCCATTAGCCTACCAAAGAAGGGTTTGGATTGGGTGGATGGAGAATATGATATCTTGAACCTGGCTATGGGTTTTTGTGGAACCATCCCTAACAATGCCGTTTTAAACGATCTTCCATGA 942 0.4607 MNDQFSMPVNGGGGDTKPRGLVHDKFSDSKFLTFIGAHEIFTVETWKAALVELIATGALMFTLTSCTVACLESHESNPKLLIPFAVFIIVFVFLIVIVPLSGGHMNPIFTFVAALKGIVTLSRAVLYVVAQCIGSTIGFFVLKSVMEPELAQTYSLGGCAIGDKGQGSSIKPHDALLLEFSCTLLVLFVGITLAFDKKRCKELGFPMVCLVVAASLALAVFLSLTVTGRPGYAGAGLNPARCLGSALLHGGPLWNGHWIFWAGPFLACIIYYSVSISLPKKGLDWVDGEYDILNLAMGFCGTIPNNAVLNDLP 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02700 313 SUPERFAMILY Aquaporin-like 43 270 IPR023271 -
Viun11g02700 313 PRINTS Major intrinsic protein family signature 219 241 IPR000425 GO:0015267|GO:0016020|GO:0055085
Viun11g02700 313 PRINTS Major intrinsic protein family signature 258 278 IPR000425 GO:0015267|GO:0016020|GO:0055085
Viun11g02700 313 PRINTS Major intrinsic protein family signature 86 110 IPR000425 GO:0015267|GO:0016020|GO:0055085
Viun11g02700 313 PRINTS Major intrinsic protein family signature 47 66 IPR000425 GO:0015267|GO:0016020|GO:0055085
Viun11g02700 313 PRINTS Major intrinsic protein family signature 123 142 IPR000425 GO:0015267|GO:0016020|GO:0055085
Viun11g02700 313 PANTHER AQUAPORIN-LIKE 25 297 - -
Viun11g02700 313 Pfam Major intrinsic protein 41 269 IPR000425 GO:0015267|GO:0016020|GO:0055085
Viun11g02700 313 Gene3D Glycerol uptake facilitator protein. 31 279 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02700 Viun-Chr11 39681444 39682845 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02700 18 270 Major Intrinsic Protein MIP AT2G37170 26.394 1.85e-20 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02700 K09866 - gmx:100797262 493.426