Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02697 ATGGACTCAGCTAATTCCCATGTAGTAGCTGTTAAACCACTTTCCAGATCTGTTCATACTAACAAACCACTCACTTCGTTGTTCAAGAAATCTGTAAGGCGAAAGTGTTATGCTTTCACCGGAGCACATGAGATTTTCAGACCAGAGATGTGGAAAGCAGCTTTAACAGAATTAACAGCAACTGCATCTCTAATGTTCACCTTGACGACTTCCATTGTTTCATGCTTGGACTCACACGGGACGGATCCTAAGCTTCTTGTTCCCTTTGCAGTTTTCATGATAGTGTTTCTGTTCCTACTGGTCACAGTTCCTCTCTCCGGGGGCCACATGAGTCCCGTTTTCACATTCATCGGTGCTTTGAAGGGTGTTGTCACTCTCACCCGTGCTCTCATCTACGTCTTAGCACAAATCATTGGCTCAATAATTGGTTTCTTCATACTAAAATGCGTCATAGACCCCAAATTAGCCTACACATATTCCTTGGGAGGTTGTGCCATTGATGGACAAAAAGTGAGTTTTGGCATTAAGCCACAGAACGCTTTGCTTGTGGAATTCGCATGCACATTTGTGGTACTCTTTGTGGGTGTCACATTGGCGTTTGACAAGAAAAGGTCTAGGGCGTTGGGCTTGCCAATGGTGTGTTTGGTGGTGGCAGGGGCCACGGCACTCGCAGTGTTTGTGTCCATAACTGTAACTGGGCGGGCCGGGTATGCTGGTGTGGGCCTCAACCCAGCAAGATGCTTGGGCCCGGCATTGCTTCATGGAGGGCCACTCTGGCATGGGCATTGGGTTTTCTGGCTTGGGCCTTTCTTGGCATGCATGGTGTATTATCTTCTGTCTATGAACCTGCCAAAGGAGGATTTGGTTTGGCTTGAGGAAGAACATGATGTTTTTGATACTTCTTTCTCAAAGAATCTGCCAGAACAATGCAATGCAGGGTTCCAACTCCAAGTCTGA 957 0.4681 MDSANSHVVAVKPLSRSVHTNKPLTSLFKKSVRRKCYAFTGAHEIFRPEMWKAALTELTATASLMFTLTTSIVSCLDSHGTDPKLLVPFAVFMIVFLFLLVTVPLSGGHMSPVFTFIGALKGVVTLTRALIYVLAQIIGSIIGFFILKCVIDPKLAYTYSLGGCAIDGQKVSFGIKPQNALLVEFACTFVVLFVGVTLAFDKKRSRALGLPMVCLVVAGATALAVFVSITVTGRAGYAGVGLNPARCLGPALLHGGPLWHGHWVFWLGPFLACMVYYLLSMNLPKEDLVWLEEEHDVFDTSFSKNLPEQCNAGFQLQV 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02697 318 Pfam Major intrinsic protein 47 274 IPR000425 GO:0015267|GO:0016020|GO:0055085
Viun11g02697 318 PANTHER AQUAPORIN-LIKE 22 300 - -
Viun11g02697 318 Gene3D Glycerol uptake facilitator protein. 35 287 IPR023271 -
Viun11g02697 318 SUPERFAMILY Aquaporin-like 43 279 IPR023271 -
Viun11g02697 318 PRINTS Major intrinsic protein family signature 52 71 IPR000425 GO:0015267|GO:0016020|GO:0055085
Viun11g02697 318 PRINTS Major intrinsic protein family signature 128 147 IPR000425 GO:0015267|GO:0016020|GO:0055085
Viun11g02697 318 PRINTS Major intrinsic protein family signature 183 201 IPR000425 GO:0015267|GO:0016020|GO:0055085
Viun11g02697 318 PRINTS Major intrinsic protein family signature 263 283 IPR000425 GO:0015267|GO:0016020|GO:0055085
Viun11g02697 318 PRINTS Major intrinsic protein family signature 224 246 IPR000425 GO:0015267|GO:0016020|GO:0055085
Viun11g02697 318 PRINTS Major intrinsic protein family signature 91 115 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02697 Viun-Chr11 39678935 39681096 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02697 34 286 Major Intrinsic Protein MIP AT1G73190 31.481 3.77e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02697 K09866 - gmx:100804160 490.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g02697 11 39678935 39681096 Viun11g02697 11 39678935 39681096 ECH