Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02670 ATGGCGTTGTCGTCACTTATTTCTAATAATATTGTTCTTTTGCTTCTTCTCTCTCTCACCAAAGAAGCTTTAGCTGTGTCAAAGCTTTCACTAACTGATCATGTTAATTCTCTTAGCCAAGAAGTAGTGACAGAACAAGAAGCTGATAGAGTTTATGGATTACCAGGACAACCACCAGTGAAGTTCAAACAATATGCAGGCTATATCACGGTCGATGAAACTCATGGAAGAGCACTGTTTTATTGGTTCTTTGAAGCCACTTTCGAACCAGAAGCAAAACCAGTTCTATTGTGGCTCAATGGAGGCCCAGGTTGTTCCTCAATTGGTTATGGAGAAGCAGAGGAGTTAGGACCCTTCTTTCCCCAGAACAGTAGCCAGCCACAACTAAAGTTGAACCCTTATTCATGGAACAATGCTGCCAATCTTTTGTTTCTGGACAGTCCTGTTGGAGTGGGATTCTCTTACACCAACACCACCAAGGATTTGAAAGAACTTGGTGATGCCATTACTGCTAAGGATTCACACACCTTCATGGTCAAGTGGTTCAGTAGATTTCCGCAATTCAGATCACACGAGTTCTACATTGCTGGCGAAAGCTATGGAGGGCACTTCGTTCCACAACTGTCGGAGCTGATTTTCGATAACAATCGCAATCCTGCCATGAAAGACTATATCAACTTCAAAGGATTCATGATTGGAAATGCGGTATTGGACGACGAAACAGATCAAAAGGGTTATGTAGATTATGCCTGGGCTCATGCAGTGATATCTGATGAATTATACCATAACATTACAACCAGATGCAATTTCAAACTTCAAAATCAAACAGATGAATGCTATGACGTTCTGGATAAGCTCTCCGATGCGTATGACGTGATTGACATGTATAGCTTGTACACTCCCTTATGTCTCAGCAACATCAGCAGCACAACCACAAAAGCCTTTTCCAAAATTAATAAATGGCCTAAAAAAACAGCTGGATATGATCCGTGTGCATCAGATTACACTGGAGTTTACCTAAACAGGCCAGAAGTCCAAAAGGCACTACATGCCAATGTCACCAAACTCTCTTATCCATGGACTCATTGCAGTAACATTATCGATGGTTGGAATGACGCACCAGCTTCCATTCTTCCTGTCATCAAGAAGCTTGCTGCTGCTGGTATTCGCATCTGGGTTTACAGTGGAGATACTGATGGATCAGTTCCTGTGACTGGAACAAGATACGGTTTACAAAAGTTGGGGCTCAAGATTGTTGAAGATTGGACTCCCTGGTATACTAGCAAACAGGTTGGGGGATGGAGAACGATTTACGATGGTCTTACTTTTGTGACCATAAGAGGTGCTGGCCATGAAGTTCCAACCTTCACTCCCAAGCCAGCTCTGCAACTGCTACGGCACTTCCTTGAAAATAAGAAATTACCATCTCATCCTATTTAA 1440 0.425 MALSSLISNNIVLLLLLSLTKEALAVSKLSLTDHVNSLSQEVVTEQEADRVYGLPGQPPVKFKQYAGYITVDETHGRALFYWFFEATFEPEAKPVLLWLNGGPGCSSIGYGEAEELGPFFPQNSSQPQLKLNPYSWNNAANLLFLDSPVGVGFSYTNTTKDLKELGDAITAKDSHTFMVKWFSRFPQFRSHEFYIAGESYGGHFVPQLSELIFDNNRNPAMKDYINFKGFMIGNAVLDDETDQKGYVDYAWAHAVISDELYHNITTRCNFKLQNQTDECYDVLDKLSDAYDVIDMYSLYTPLCLSNISSTTTKAFSKINKWPKKTAGYDPCASDYTGVYLNRPEVQKALHANVTKLSYPWTHCSNIIDGWNDAPASILPVIKKLAAAGIRIWVYSGDTDGSVPVTGTRYGLQKLGLKIVEDWTPWYTSKQVGGWRTIYDGLTFVTIRGAGHEVPTFTPKPALQLLRHFLENKKLPSHPI 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02670 479 Gene3D - 331 368 - -
Viun11g02670 479 Gene3D alpha/beta hydrolase 45 305 IPR029058 -
Viun11g02670 479 FunFam Carboxypeptidase 377 471 - -
Viun11g02670 479 ProSitePatterns Serine carboxypeptidases, histidine active site. 441 458 IPR033124 GO:0004185
Viun11g02670 479 Gene3D - 377 470 - -
Viun11g02670 479 FunFam Carboxypeptidase 45 305 - -
Viun11g02670 479 Pfam Serine carboxypeptidase 55 471 IPR001563 GO:0004185|GO:0006508
Viun11g02670 479 ProSitePatterns Serine carboxypeptidases, serine active site. 195 202 IPR018202 GO:0004185
Viun11g02670 479 FunFam Carboxypeptidase 327 474 - -
Viun11g02670 479 SUPERFAMILY alpha/beta-Hydrolases 46 474 IPR029058 -
Viun11g02670 479 PRINTS Carboxypeptidase C serine protease (S10) family signature 132 144 IPR001563 GO:0004185|GO:0006508
Viun11g02670 479 PRINTS Carboxypeptidase C serine protease (S10) family signature 145 155 IPR001563 GO:0004185|GO:0006508
Viun11g02670 479 PRINTS Carboxypeptidase C serine protease (S10) family signature 441 454 IPR001563 GO:0004185|GO:0006508
Viun11g02670 479 PRINTS Carboxypeptidase C serine protease (S10) family signature 181 206 IPR001563 GO:0004185|GO:0006508
Viun11g02670 479 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 50 458 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02670 Viun-Chr11 39566062 39574598 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02670 333 474 Calmodulin-binding Proteins AT2G22960 26.712 4.56e-12 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02670 K16297 - gmx:100797264 760.755