Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02667 ATGGTGTTGTTCCCACTTATTTCCAATATTCTTATTCTTCTTCTTTTGTTTTTCACCAAAGAAGCTTTAGCTGTGTCAAAGCTTTCAGTAACTGATTATGATAACTATCTTAGCCGGGAAATAGTGGCAGAACGAGAAGCTGATAGAGTTTATGGATTACCAGGGCAACCACCAGTGAAATTCAAACAATATGCAGGTTATATCACTGTCAATGAAACTCATGGAAGAGCACTCTTTTATTGGTTCTTTGAAGCCACTCACAAACCAGAAGAAAAACCTGTTCTATTGTGGCTCAATGGAGGCCCAGGTTGTTCCTCAATTGGTTATGGAGAAGCAGAGGAGTTAGGACCCTTCTTTCCTCAGGACAGTTTCCACCCAAAGCTAAAGTTGAACCCTTACTCATGGAACAAAGCTGCCAATCTTTTGTTTTTGGAAAGCCCTGTTGGGGTGGGATTCTCCTACACCAACACCAGCAGTGATTTGGATGAGCTTGGTGACGCCATTACTGCTAAAGATTCACACACCTTCATAGTCAAGTGGTTTCGGAGATTTCCACAATTCAGATCACACGAGTTCTACATTGCTGGCGAAAGTTATGGAGGGCACTACGTTCCACAACTGTCGGAGCTCATTTTCGATCACAATCGCAATCGTGCCAAGAAAGACTACATCAACTTCAGAGGATTCATGATTGGAAATGCAGCATTGGACTACGAAACAGATCAAAAGGGTTTGGTGGAGTATGCCTGGGATCATGCAGTGATATCTGATGAATTATACCATAACATTACAACCAGATGCAATTTCAAACTTCAAAATCAAACAGATGAATGCATCGACGATCTGTCTAATTTCTCCGTAGCGTATGACGTTATTGACATGTATAGCTTGTACACTCCCACATGTCTCAACAGCATCAGCAGCAACACAGCCCCTGTCGTCAGAGGCACAACCTCAGAAACTTTTTCCAAAATTAATAAGTGGCATAGAAAAGCAGAGGGATATGATCCATGTGCATCCGATTACACTGGATTTTACCTAAACAGGCCAGAAGTCCAAAGGGCACTACATGCCAATGTCACCAAACTCTCCTATCCATGGACTCATTGCAGTAGCCTCATGGGACCTTGGAAAGATTCACCACTGTCCATCCTTCCTGTCATCAAGAAGCTTGTTGCTGGTGGTCTTCGCATTTGGGTTTACAGTGGAGATACCGATGGAGCAGTTCCTGTGACTGGAACAAGATACACTCTGAAAAAGTTGGGGCTCAAGATTGTTGAAGATTGGACTCCCTGGTATACTAGCAAACAGGTTGGGGGATGGAGAACGATTTACGATGGTCTTACTTTTGTGACCATAAGAGGTGCTGGCCATCAGGTTCCAACCTACACTCCCAAACCAGCTCTGCAACTGCTACGACACTTCCTTGCAAATAAGAAATTACCTTCTCATCCTATTTAA 1461 0.4319 MVLFPLISNILILLLLFFTKEALAVSKLSVTDYDNYLSREIVAEREADRVYGLPGQPPVKFKQYAGYITVNETHGRALFYWFFEATHKPEEKPVLLWLNGGPGCSSIGYGEAEELGPFFPQDSFHPKLKLNPYSWNKAANLLFLESPVGVGFSYTNTSSDLDELGDAITAKDSHTFIVKWFRRFPQFRSHEFYIAGESYGGHYVPQLSELIFDHNRNRAKKDYINFRGFMIGNAALDYETDQKGLVEYAWDHAVISDELYHNITTRCNFKLQNQTDECIDDLSNFSVAYDVIDMYSLYTPTCLNSISSNTAPVVRGTTSETFSKINKWHRKAEGYDPCASDYTGFYLNRPEVQRALHANVTKLSYPWTHCSSLMGPWKDSPLSILPVIKKLVAGGLRIWVYSGDTDGAVPVTGTRYTLKKLGLKIVEDWTPWYTSKQVGGWRTIYDGLTFVTIRGAGHQVPTYTPKPALQLLRHFLANKKLPSHPI 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02667 486 SUPERFAMILY alpha/beta-Hydrolases 46 481 IPR029058 -
Viun11g02667 486 Pfam Serine carboxypeptidase 54 478 IPR001563 GO:0004185|GO:0006508
Viun11g02667 486 ProSitePatterns Serine carboxypeptidases, histidine active site. 448 465 IPR033124 GO:0004185
Viun11g02667 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 448 461 IPR001563 GO:0004185|GO:0006508
Viun11g02667 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 180 205 IPR001563 GO:0004185|GO:0006508
Viun11g02667 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 144 154 IPR001563 GO:0004185|GO:0006508
Viun11g02667 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 143 IPR001563 GO:0004185|GO:0006508
Viun11g02667 486 FunFam Carboxypeptidase 384 478 - -
Viun11g02667 486 ProSitePatterns Serine carboxypeptidases, serine active site. 194 201 IPR018202 GO:0004185
Viun11g02667 486 Gene3D alpha/beta hydrolase 44 304 IPR029058 -
Viun11g02667 486 Gene3D - 338 374 - -
Viun11g02667 486 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 49 465 IPR001563 GO:0004185|GO:0006508
Viun11g02667 486 FunFam Carboxypeptidase 44 304 - -
Viun11g02667 486 Gene3D - 384 477 - -
Viun11g02667 486 FunFam Carboxypeptidase 334 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02667 Viun-Chr11 39551974 39554780 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02667 345 481 Calmodulin-binding Proteins AT2G22960 27.536 2.92e-13 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02667 K16297 - gmx:100797264 774.237