Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02665 ATGGCTTTGTCTTCACTTATTTCCAATATTCTTCTTCTGCTTCTTCTCTCTTTCACCAAACAAGCTTTATCTGTGTCAAAGCTTTCAGTAACTGATCATAATCATAATTATCTTAGCCGGGAAATTCTGGCAGAACAAGAAGCTGATAGAGTTTATGGATTACCAGGGCAACCACCAGTGAAATTCAAACAATACGCAGGTTATATCACTGTCAATGAAACTCATGGCAGAGCACTGTTTTATTGGTTCTTCGAAGCCACTCACAAACCAGAAGAAAAACCAGTTCTATTGTGGCTCAATGGAGGCCCAGGTTGTTCCTCGATTGGTTATGGAGAAGCAGAGGAATTAGGACCCTTCTTCCCTCAAGACAGTAGCCAGCCAAAGCTAAAGTTGAACCCTTATTCATGGAACAATGCTGTGAATCTTCTGTTTTTGGAAAGCCCTGTTGGAGTGGGATTCTCCTACACCAACACCACCAGTGACATTGATCAGCTTGGTGACAGCATTACTGCTAAAGATTCACACATCTTTATCATAAACTGGTTTAGGAGGTTCCCACAATTCAGATCACACAAGTTCTACATTGCTGGTGAAAGCTATGCAGGGCACTATGTTCCACAACTTTCTGAGCTTATCTTCGATAACAATCTCAACCGTGCTGAGAAAGACTACATTAACTTCAAAGGATTCCTGATTGGAAATGCATTATTGGACGACGAAACAGATCAAAAGGGTATGATAGATTATGCATGGGATCATGCAGTGATATCTGATGCACTATACCACAACATCACAGCCATATGCAATTTCAACCGTCCAATTCAAAACCAGACAACCGAATGCAACACGGAACTGAATAAGTACTTCGATGTGTATAAGATTATTGACATGTATAGCTTGTACACTCCCAGGTGTTTCAGCAACCTCAGCAGCACCTCTCAAACTTCTTCCAAAATTAATAGGTGGCAAAGAAAACGAGCTGGCTATGATCCCTGTGCATCCGATTACACTGAAGCTTACCTGAACATTCCAGAAGTTCAAAAGGCACTGCATGCCAATGTCACAAAAATTCCCTATCCATGGACTCATTGCAGTGATAACATCACATTTTGGAATGACTCACCACAGTCCATTCTTCCTGTCCTCAAGAAGCTTGTTGCTGGTGGTATTCGCATCTGGGTTTACAGTGGAGACACTGATGGAAGAATTCCAGTAACAGCGACAAGATACACACTGAGAAAGTTGGGACTTGGGATTGTGGAGGATTGGAGTCCATGGTACACTAGCCGGCAGGTGGGAGGATGGAGCATTGTGTATGATGGACTTACTTTTGTTACCATAAGAGGTGCTGGCCATCAAGTTCCAACTTTCACTCCCAAGCAAGCTCTGCAGTTACTTCGACACTTCATAGATAATAAGAAACTACCATCTCAACCAATTTAA 1443 0.4213 MALSSLISNILLLLLLSFTKQALSVSKLSVTDHNHNYLSREILAEQEADRVYGLPGQPPVKFKQYAGYITVNETHGRALFYWFFEATHKPEEKPVLLWLNGGPGCSSIGYGEAEELGPFFPQDSSQPKLKLNPYSWNNAVNLLFLESPVGVGFSYTNTTSDIDQLGDSITAKDSHIFIINWFRRFPQFRSHKFYIAGESYAGHYVPQLSELIFDNNLNRAEKDYINFKGFLIGNALLDDETDQKGMIDYAWDHAVISDALYHNITAICNFNRPIQNQTTECNTELNKYFDVYKIIDMYSLYTPRCFSNLSSTSQTSSKINRWQRKRAGYDPCASDYTEAYLNIPEVQKALHANVTKIPYPWTHCSDNITFWNDSPQSILPVLKKLVAGGIRIWVYSGDTDGRIPVTATRYTLRKLGLGIVEDWSPWYTSRQVGGWSIVYDGLTFVTIRGAGHQVPTFTPKQALQLLRHFIDNKKLPSQPI 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02665 480 Gene3D - 378 471 - -
Viun11g02665 480 FunFam Carboxypeptidase 45 307 - -
Viun11g02665 480 ProSitePatterns Serine carboxypeptidases, histidine active site. 442 459 IPR033124 GO:0004185
Viun11g02665 480 ProSitePatterns Serine carboxypeptidases, serine active site. 195 202 IPR018202 GO:0004185
Viun11g02665 480 PRINTS Carboxypeptidase C serine protease (S10) family signature 442 455 IPR001563 GO:0004185|GO:0006508
Viun11g02665 480 PRINTS Carboxypeptidase C serine protease (S10) family signature 132 144 IPR001563 GO:0004185|GO:0006508
Viun11g02665 480 PRINTS Carboxypeptidase C serine protease (S10) family signature 181 206 IPR001563 GO:0004185|GO:0006508
Viun11g02665 480 PRINTS Carboxypeptidase C serine protease (S10) family signature 145 155 IPR001563 GO:0004185|GO:0006508
Viun11g02665 480 SUPERFAMILY alpha/beta-Hydrolases 46 475 IPR029058 -
Viun11g02665 480 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 50 459 IPR001563 GO:0004185|GO:0006508
Viun11g02665 480 FunFam Carboxypeptidase 378 472 - -
Viun11g02665 480 Gene3D - 332 369 - -
Viun11g02665 480 FunFam Carboxypeptidase 328 475 - -
Viun11g02665 480 Gene3D alpha/beta hydrolase 45 307 IPR029058 -
Viun11g02665 480 Pfam Serine carboxypeptidase 55 472 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02665 Viun-Chr11 39545553 39550616 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02665 340 475 Calmodulin-binding Proteins AT2G22960 29.927 5.90e-15 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02665 K16297 - gmx:100797264 847.81