Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02653 ATGGCATTCTCTTTTTTTCGGAGTCTTTTCTTCACCTTCCTTTTAACTATAGAAATCCAAGAACAAAGTTCCGATAGAAATGAACAAGAAGGTGATAGGGTAAAATATTTACCCGAACAACCAATAGTGAATTTTAATCATTATGCTGGTTATGTCAGTTTAAAACCTGACAAGGACAAAGCACTCTTCTACTGGTTTTTTGAAGCAGAAAATGATCCATCACAAAAACCTCTTGTACTTTGGCTCACCGGAGGACCTGGTTGTTCCTCGGTTAGCTTTGGAGCAACACAAGAGATCGGTCCGTTTTTGGTGGATCAAGAAAAACACTTAAAACTAAATGAATTTTCTTGGAATAAAGTTGCAAACATCATATTCCTGGAGTCACCTATTGGTGTTGGATTTTCATACACCAATAATACCAAGGACTTAGATGAACTTGGTGACCAAGTTGTTGCATCAGATAATTATGATTTTCTGCTCGGTTGGTTCAGAAGGTTTCCAAATTTCAGAACCAACGAATTTTACATTGTAGCAGAGAGTTATGGAGGACATTATGCTCCACAACTTGCGGACCTTATCCATGAAGGAAATAAAAAAGGTCCATACATTAATCTGAAAGGATTCATGATGGGAAATGCTGTAATAAATGATATTACAGATTTTAAGGGAATCTACGACTTTGCATTGGGACATACAATAATCTCAAAGGAGGTCTACGATGGAATCACAGGAGACTGTGATCTCACTAAAGAGAGACAGACGAATGATTGTATAATGAATTTGGCCAGGTTCTTAAAGGCTTATTCAGATATTGACATGTTCAACATTTACTCGCCGATTTGTTTCAGAGATAATAACAAAACAGTCCCAAAAAAACCCATTGTAACTCGTCATGATCTCACCCAAGATGTTCATTGGAACATATTGCCATTATCAGGATACGATTTTTGTCCTGATGATCACGTGATAGAATATTTTAATAGGAAGGATGTTCAGAGGGCCATCCATGCTAATGTTACAAATTTATCTTATCCATATACCCTCTGCAGCACTGTAATTGAGAAATGGAACGACTCACCAACCACGATGCTGCCACTGATTAAGAAACTTTTAGGGATTGGTTTACGTATTTGGATGTACAGTGGAGACACTGATGGCAGAGTTCCAGTACTGTCGACCAGATACAGTCTTGAGGAGATGAAGTTGAATGTAACGGAAGGATGGAGAGCATGGTTTTCCGGTGGACAAGTGGGAGGATGGGTGGAGGAGTACGACGGTGGTCTTACTTTTGCCTCCATTAGAGGTGCTGGCCACCAAGCTCCGGCGCATAAACCACAACAAGCGCTCTTTCTTTTCTCTCATTTCCTCTCTTCTCGACCTCTTCCATCTTCTCGTTTTTAA 1401 0.3947 MAFSFFRSLFFTFLLTIEIQEQSSDRNEQEGDRVKYLPEQPIVNFNHYAGYVSLKPDKDKALFYWFFEAENDPSQKPLVLWLTGGPGCSSVSFGATQEIGPFLVDQEKHLKLNEFSWNKVANIIFLESPIGVGFSYTNNTKDLDELGDQVVASDNYDFLLGWFRRFPNFRTNEFYIVAESYGGHYAPQLADLIHEGNKKGPYINLKGFMMGNAVINDITDFKGIYDFALGHTIISKEVYDGITGDCDLTKERQTNDCIMNLARFLKAYSDIDMFNIYSPICFRDNNKTVPKKPIVTRHDLTQDVHWNILPLSGYDFCPDDHVIEYFNRKDVQRAIHANVTNLSYPYTLCSTVIEKWNDSPTTMLPLIKKLLGIGLRIWMYSGDTDGRVPVLSTRYSLEEMKLNVTEGWRAWFSGGQVGGWVEEYDGGLTFASIRGAGHQAPAHKPQQALFLFSHFLSSRPLPSSRF 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02653 466 Gene3D - 317 354 - -
Viun11g02653 466 Pfam Serine carboxypeptidase 40 457 IPR001563 GO:0004185|GO:0006508
Viun11g02653 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 136 IPR001563 GO:0004185|GO:0006508
Viun11g02653 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 428 441 IPR001563 GO:0004185|GO:0006508
Viun11g02653 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 187 IPR001563 GO:0004185|GO:0006508
Viun11g02653 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 125 IPR001563 GO:0004185|GO:0006508
Viun11g02653 466 SUPERFAMILY alpha/beta-Hydrolases 30 462 IPR029058 -
Viun11g02653 466 Gene3D alpha/beta hydrolase 28 282 IPR029058 -
Viun11g02653 466 Gene3D - 363 457 - -
Viun11g02653 466 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 34 445 IPR001563 GO:0004185|GO:0006508
Viun11g02653 466 ProSitePatterns Serine carboxypeptidases, serine active site. 176 183 IPR018202 GO:0004185
Viun11g02653 466 ProSitePatterns Serine carboxypeptidases, histidine active site. 428 445 IPR033124 GO:0004185
Viun11g02653 466 FunFam Carboxypeptidase 363 458 - -
Viun11g02653 466 FunFam Carboxypeptidase 28 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02653 Viun-Chr11 39469426 39473959 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02653 374 461 Calmodulin-binding Proteins AT2G22960 34.091 1.71e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02653 K16297 - gmx:100799746 628.632