Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02652 ATGGCTATGGAAATCTTACTCGTTGTCTTTCTGTTGAGCAACGTTGCCGCCGGAGCTGAATATTCCGCCGGCTATAACATACGGGATGATAAGGTGACAAATTTGCCGGGACAACCACCGGTAAAATTTGATCATTATGCTGGTTACGTGAAGCTAAGAGAAGAAGAAGACAAAGCACTATTTTATTGGTTTTTTGAAGCTCAAGAGGCTCCGTCGGATAAACCTCTTGTGCTTTGGCTTAGTGGAGGACCTGGTTGTTCGTCAATTGCTTTTGGAGCAGCCCAGGAGATTGGTCCTTTTCTTGTTGATGGTCATGAGCGTCTTACGTTCAACAGATACTCCTGGAACAGAGTTGCCAATATCATATTCTTGGAATCACCTATTAGTGTGGGTTTTTCTTACACTAATAATTCCGAAGACTTAAGTAAGCTCGGTGATCAAGTTGTTGCTCTTGATAACTATGCTTTCTTAGTTGGTTGGTTCAAGAGATTTCCAAGATTCAAATCTCATGAATTTTACATCGTAGGAGAGAGCTATGGAGGACATTATGCTCCTCAGCTGGCCGAGGTCATACATGAAGGAAACAGGAACGGCCCTTACATAAATCTGAAGGGATTCATGGTAGGAAATGCTGTGATTAACTATGTCACAGATTTAAAAGGCGTGTTTGATTTTGCTCTGTGTCATGCCATCATTACAAAGCAAGTATATGATGGCATAAGAGAGACGTGCGATTTCACGAGAAAGGAGCAGACGAAGGAATGTAGCCAGAACGTGGGCAACTTTCTAGAGGCCTATACTGATATAAATATATTCAGTATCTACTCTCCTGTCTGTCCGGCTGACTATGACAAACCACTTTCAGACACGCCTAATGTTGCTCCGTATGCTGTCTCTGAATTTGATATCTGGAATATGATGCCGTCAACGGGATACGATCCATGTGAAGTAATTCACGTGCAGAAGTATTTCAATAAGATGGACGTCCAGAAGGCCATTCATGCATACCTCCCTAACATGTCTCAACCCCACACCGTATGCAGCACAAAAATAAAAAATTGGAATGACTCGCCAACCACAGTTCTCCCGGTGATTCAGAAACTCTTGCGTGCCGGTTTACGCATTTGGATATACAGTGGAGATACTGATGGTAGAGTTCCACTGATATCAACGAGATACAGTTTGCGAGAGTTGAATCTGAATGTGACGGAAAAGTGGAGAGTTTGGTTTGAAGAAAGAGAAGTGGCGGGGTGGGTGGAGGAGTACGAGGGTGGTCTCACTTTTGCCTCCGTCAGAGGTGCTGGCCACCAGGTTCCAGTTTATAAACCACAGCAAGCTCTTTCTCTTTTCTCCCACTTTCTATCTGCACAACCACTTCCGTCCTCTCGCTTCTGA 1395 0.4394 MAMEILLVVFLLSNVAAGAEYSAGYNIRDDKVTNLPGQPPVKFDHYAGYVKLREEEDKALFYWFFEAQEAPSDKPLVLWLSGGPGCSSIAFGAAQEIGPFLVDGHERLTFNRYSWNRVANIIFLESPISVGFSYTNNSEDLSKLGDQVVALDNYAFLVGWFKRFPRFKSHEFYIVGESYGGHYAPQLAEVIHEGNRNGPYINLKGFMVGNAVINYVTDLKGVFDFALCHAIITKQVYDGIRETCDFTRKEQTKECSQNVGNFLEAYTDINIFSIYSPVCPADYDKPLSDTPNVAPYAVSEFDIWNMMPSTGYDPCEVIHVQKYFNKMDVQKAIHAYLPNMSQPHTVCSTKIKNWNDSPTTVLPVIQKLLRAGLRIWIYSGDTDGRVPLISTRYSLRELNLNVTEKWRVWFEEREVAGWVEEYEGGLTFASVRGAGHQVPVYKPQQALSLFSHFLSAQPLPSSRF 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02652 464 ProSitePatterns Serine carboxypeptidases, serine active site. 174 181 IPR018202 GO:0004185
Viun11g02652 464 Gene3D alpha/beta hydrolase 27 281 IPR029058 -
Viun11g02652 464 PRINTS Carboxypeptidase C serine protease (S10) family signature 426 439 IPR001563 GO:0004185|GO:0006508
Viun11g02652 464 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 123 IPR001563 GO:0004185|GO:0006508
Viun11g02652 464 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 134 IPR001563 GO:0004185|GO:0006508
Viun11g02652 464 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
Viun11g02652 464 FunFam Carboxypeptidase 312 459 - -
Viun11g02652 464 FunFam Carboxypeptidase 26 281 - -
Viun11g02652 464 Gene3D - 361 455 - -
Viun11g02652 464 Gene3D - 315 351 - -
Viun11g02652 464 ProSitePatterns Serine carboxypeptidases, histidine active site. 426 443 IPR033124 GO:0004185
Viun11g02652 464 FunFam Carboxypeptidase 361 456 - -
Viun11g02652 464 SUPERFAMILY alpha/beta-Hydrolases 27 461 IPR029058 -
Viun11g02652 464 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 31 443 IPR001563 GO:0004185|GO:0006508
Viun11g02652 464 Pfam Serine carboxypeptidase 36 455 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02652 Viun-Chr11 39425571 39427992 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02652 347 459 Calmodulin-binding Proteins AT2G22960 32.743 2.31e-16 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02652 K16297 - gmx:100799746 636.336