Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02650 ATGGTTTTCACAGACAATGACAGTGCAAACACAAGTGAAATATACAAAGCTCAAATGCACGTGAACAAATATCTCCTCGGCTTCCAAAGCTGCATGGCGGTGAAGTATGCGACGGAGCTAGGCATCGCCGACGCAATCCACCGCCACGGAAAACCTATCACTCTCTCCGACTTGGCCGCAGCGCTGAATCTTCCCCCTTCAAAAGTTGGTGTTCTCCATCGCTTCATGCGCCTTCTGTCACACAATGGCTTCTTCACCAAAACACCTTCACAGAACTCTGAAGAAGAAGAAGAAACATATTCTCTGACTCTTGCATCAAAGTTTCTGGTCAGAAGCAACTCCTTCTGCTTAGCACCTAATGCGGAAGTGGCGTATCATCCCAGTTTGTTCAACATGTGGAACTCCTCCAACAAGGAAGTGCTTACAGAGGATACTCAGGTTCCGTTGTTCCAGAGCGTGACCGGAGAGACTTACTTTAACTTCATCAACAATGATTCTCAGTTTCTGAACGTATTTCAGAAGGCTGTGGCCGCTGATTCTGAAATGATCAAACTGGGTCTGCAACAATGCAAGCACGTGTTTGAAGGATTGGATTCTCTTATCGATGTGGGAGGTGGCACTGGTGCTGTCTCCAGGGTCATACTCGAAGCCTTTCCTCACTTGAAATGCACAGTCCTTGACCAACCACAAGTTGTGGCTAATTTGGAAACAACCCAAAATCTCAGTTTTGTTGGTGGTGATATGTTTCAATCAATTCCTTCCGCTGATGCAGTTTTACTCAAGTGGGTTCTGCATAATTGGGATGATGAGCATTCTATAAAGATATTGAAGAAGTGCAAAGAAGCGATTTCTGGGAAAGGGAAGGAGGGAAAGGTGATAATCATAGACGTGGTGATTGATGAAGCAGGTGATGATCGAGATGTGACTGAGTTGAAACTGAACTTTGACTTGGCGATGTTGACTCTCTTGAATGGAAAAGAAAGAGAAAAGAAAGAATGGGAGAAACTTATACACCGTGCTGGCTTCACCAGCTGCAAGTTTAGTCCAGCGTTTGGCTTCAAATCTATCATAGAAGTTTATCCTTGA 1086 0.4475 MVFTDNDSANTSEIYKAQMHVNKYLLGFQSCMAVKYATELGIADAIHRHGKPITLSDLAAALNLPPSKVGVLHRFMRLLSHNGFFTKTPSQNSEEEEETYSLTLASKFLVRSNSFCLAPNAEVAYHPSLFNMWNSSNKEVLTEDTQVPLFQSVTGETYFNFINNDSQFLNVFQKAVAADSEMIKLGLQQCKHVFEGLDSLIDVGGGTGAVSRVILEAFPHLKCTVLDQPQVVANLETTQNLSFVGGDMFQSIPSADAVLLKWVLHNWDDEHSIKILKKCKEAISGKGKEGKVIIIDVVIDEAGDDRDVTELKLNFDLAMLTLLNGKEREKKEWEKLIHRAGFTSCKFSPAFGFKSIIEVYP 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02650 361 Pfam Dimerisation domain 32 80 IPR012967 GO:0046983
Viun11g02650 361 FunFam O-methyltransferase ZRP4 112 361 - -
Viun11g02650 361 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 361 IPR016461 GO:0008168
Viun11g02650 361 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 360 IPR029063 -
Viun11g02650 361 PANTHER O-METHYLTRANSFERASE 31 346 IPR016461 GO:0008168
Viun11g02650 361 Gene3D - 3 109 IPR036388 -
Viun11g02650 361 Pfam O-methyltransferase domain 138 342 IPR001077 GO:0008171
Viun11g02650 361 SUPERFAMILY "Winged helix" DNA-binding domain 11 113 IPR036390 -
Viun11g02650 361 PIRSF O-mtase 2 361 IPR016461 GO:0008168
Viun11g02650 361 Gene3D Vaccinia Virus protein VP39 111 361 IPR029063 -
Viun11g02650 361 CDD AdoMet_MTases 200 299 - -
Viun11g02650 361 FunFam Coniferyl alcohol 9-O-methyltransferase 4 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02650 Viun-Chr11 39323606 39325042 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02650 32 356 Monolignol Biosynthesis Gene Families AT5G54160 31.642 7.44e-47 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02650 K22588 K13259 gmx:106795493 457.218