Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02640 ATGGCACATAGAAATCCAAGTATCACTATAGGTTTTGTTGTCACTACGTTGGTGTTGTTAGCCACAGTATGTGATGCACAATTGTCTTCAAAGTTTTATGACAGTACATGTCCCAATGCACTTTCCACCATCAGAACTGTGATTCGTACTGCAGTTTCTAAAGAACGCCGCATGGCTGCCTCTCTCATTCGCCTTCATTTTCACGATTGTTTTGTTCAGGGTTGTGATGCATCAATTTTGCTTGATGACAGCTCCTCCATTGAGAGCGAAAAGACTGCACTTCAGAATGTTAACTCAGTAAGGGGATATAACGTCATCGATCAAGCAAAAACTGAGGTGGAGAAAGTTTGTCCAGGAGTTGTATCATGTGCAGACATTGTAGCAGTAGCTGCTCGTGATGCATCATTTGCTGTGGGTGGTCCATCATGGACAGTGAATCTTGGAAGAAGAGATTCTACCACAGCAAGCAAAAGTGAAGCTACTAGTGACCTTCCACTTTTCACAGACGATCTTGACACTCTTATTTCTAGATTCCAAAAGAAGGGACTCACTGCCAGAGACATGGTTACTCTATCTGGTGCTCACACAATTGGACAAGCTCAATGTTTCACATTCCGTGGAAGGATATACAACAATGCAAGTGACATTGATGCTGGATTTGCTAGCACTCGTCGACGGGGTTGTCCTTCCCTTAATAACAACGAAAATGACAAGAAATTGGCAGCACTAGATTTGGTGACACCTAATTCATTTGACAACAACTACTTCAAGAATTTGATTCAGAAGAAGGGTCTTCTTCACTCTGATCAAGTGCTATTCAGTGGAGGCTCTACAGATTCTATTGTGTCCGAATACAGCGAAAATCCAACAACATTTAAGTCTGACTTTGCAGCTGCTATGATCAAAATGGGAGATATTCAGCCTTTAACCGGTTCAGCTGGAATTATCAGAAAGATTTGCAGCTCTGTCAATTAA 975 0.4185 MAHRNPSITIGFVVTTLVLLATVCDAQLSSKFYDSTCPNALSTIRTVIRTAVSKERRMAASLIRLHFHDCFVQGCDASILLDDSSSIESEKTALQNVNSVRGYNVIDQAKTEVEKVCPGVVSCADIVAVAARDASFAVGGPSWTVNLGRRDSTTASKSEATSDLPLFTDDLDTLISRFQKKGLTARDMVTLSGAHTIGQAQCFTFRGRIYNNASDIDAGFASTRRRGCPSLNNNENDKKLAALDLVTPNSFDNNYFKNLIQKKGLLHSDQVLFSGGSTDSIVSEYSENPTTFKSDFAAAMIKMGDIQPLTGSAGIIRKICSSVN 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02640 324 CDD secretory_peroxidase 27 323 IPR033905 GO:0004601|GO:0042744
Viun11g02640 324 FunFam Peroxidase 165 303 - -
Viun11g02640 324 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun11g02640 324 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun11g02640 324 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun11g02640 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun11g02640 324 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun11g02640 324 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun11g02640 324 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun11g02640 324 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun11g02640 324 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun11g02640 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Viun11g02640 324 Pfam Peroxidase 45 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun11g02640 324 PANTHER PEROXIDASE 72-RELATED 21 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun11g02640 324 ProSitePatterns MIP family signature. 3 11 IPR022357 -
Viun11g02640 324 SUPERFAMILY Heme-dependent peroxidases 27 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Viun11g02640 324 Gene3D - 31 324 - -
Viun11g02640 324 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun11g02640 324 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun11g02640 324 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun11g02640 324 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun11g02640 324 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun11g02640 324 FunFam Peroxidase 31 171 - -
Viun11g02640 324 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Viun11g02640 324 ProSiteProfiles Plant heme peroxidase family profile. 27 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun11g02640 324 Gene3D Peroxidase, domain 2 165 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02640 Viun-Chr11 39260957 39262446 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02640 7 324 Peroxidase AT1G14550 66.875 9.87e-157 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02640 K00430 - gmx:100811641 551.977