Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02625 ATGTACTTGAGGAGAATACAATGCAGGAGAGATCGAGTATGGGCTTTGGTGTTGCAGCCATCAAAATACTTCTTTAGGCCAAGACTCTCTGGTCATCAATACTTTCAATCTTTGTCCCCAAAGACTGCAGTGGAAGAATATGCTTCACATGGAAGGATCATCCCAGAACGTCTTTTAGGTTCATATTCATGTAAACATACTTCATCTACAATTAGTTTTGCTGCTCAGGACAAAAGGCCTAGTTTATGTCATAACAGTACTCAGTTGCGTGCCTATAGTTCTGAAAGTGATGGAAGAAATGCAAGTGAGGATAAACAAGTACATGGTAGTGATGGAACCAACTTTGATAAAAGGCAGAATCAACAAGAGAAGTTTGGGAAAGAGGTTGAGTACTGCAATGCACATGCACGACTTGGAGAACAGGAACAAGAGGAATGGCTTAATAATGAGAGGCTAACTATAGAAAATAAAAGGAGAGAATCACCATTTTTGACAAGGAGGGATAAGTTTAAAAATGAGTTCATAAGAAGAATTCTTCCTTGGGAGAAAATACATATTTCTTGGGATACATTTCCTTATCATATTCATGAAAATACCAAAAATCTTCTGGTGGAATGTGCTGCTTCCCATTTGAGACATAATAAGTTTGCTTCAACTTTTGGTATTGGGCTCTCATCTTCAAGTGGGAGAATATTGCTTCAGAGCATTCCTGGCACTGAGTTGTATCGTGAGAGATTAGTTAGAGCTCTTGCACAAGATTTACAAGTTCCTCTTTTAGTGCTCGATAACAGCATCCTTGCTCCTTATGATATTGATGATGATTTATCATCAGACTACGAATCTGATGATGATAATGCAGAGTCTGGGGAGGAGGGTTCTCTTGAATCAGAGAATGATGATGATAATGAAGCCAGCAATGAAGAAGAGTGGGCTAGCAGTACAGAGGCAAAGTCAGATGCAAGTGACAATGAAGATGCAGTAGCATCAGCTGAAGCACACCTTAAGAAGGTTAAAGCAGCTGTTCTTCGGAAACTTGTCCCTTACAATGTCGAGGAATTTGAGAAGATTGTGGCTGGAGAATCTGAAAGTTCGGAGTCCTCCAAGTCTAATTCTAATGATACCAAATCTTCTGATAAATCTGGATGCCAGCTAAAGAAAGGTGACCGTGTGAAGTACATTGGGCCATCTGTTCAAGTTACAGACGAGGATAGGGTTATACTGGGGAAGATACCAACATCTGATGGTCCAACTAATGCTTATACTATTATACATGGCAGACCTTTAACTAATGGTCAGAGAGGAGAGGTCTATGAGGTCAATGGCGATCGAGTTGCAGTCATCTTGGATATTAATGAAGACAAGGTCAACGAGGGTGAGGTGGAGAACCTTAGTGATGATCATACGAAACCCCCAATCTATTGGATTCATGTTAAGGACATTGAGAATGATCTTGATGCTCAATCACAGGATTGCTACATTGCTGTGGAGGCTTTATGTGAGGTTTTGCGTAGAAAACAGCCTCTTATTGTCTATTTTCCTGACAGTTCACATTGGTTACATAAATCAGTTCCTAAGTCAAACCGAAATGAGTTTTTTCAAAGGGTTGAGGAGATGTTTGACCAGTTATCTGGTCCTATAATATTGATTTGTGGGCAAAATAAAGTACAGTCAGGGTCAAAGGAGAAAGAACAATTTACAATGATACTACCAAATTTTGGACGTGTTGCTAAGCTGCCTCTTTCTCTGAAGCGTTGGACTGAGGGAATTAAAGGGGACAAGACATCAGAAGATGACGAAATTAACAAGCTCTTTTCTAATGTTCTGAGTATACATCCACCCAAGGATGAGAATCAGCTGGCAACATTCAAGAAACAACTTGAAGAAGATAAAAAAATCGTGACTTCACGAAGTAATTTGAGTATACTACGGAAGGTTCTCGAAGAACATCAGCTATCATGCATTGACCTTTTACATTTAAATACTGATGGCATTGTTTTGACAAAGCTCAAAGCTGAAAAAGTAGTAGGCTGGGCAAAAAATCACTATTTGTCGTCTTGCTTGCTTCCTTCTGTTAAAGGAGAAAGATTGTGCCTACCTCGTGAAAGTCTTGAAATTGCAGTCTCAAGATTGACGAGCCAGGAGACAATGTCACGGAAGTCTTCTCAGAGCCTCAAGAACCTTGCAAAGGATGAGTTTGAGAGCAATTTCATTTCATCTGTAGTACCTCCTGGTGAAATAGGAGTGAAGTTTGATGACGTAGGTGCTCTTGAAGATGTGAAAAAGGCACTTCAAGAACTCGTAATTCTTCCAATGAGAAGGCCAGAGCTTTTTTCTCGAGGAAATCTGTTACGGCCCTGTAAAGGAATTTTACTTTTTGGTCCTCCTGGCACTGGTAAGACCCTTCTGGCGAAGGCACTTGCAACTGAAGCTGGTGCAAATTTTATTAGCATAACTGGTTCGACCCTTACTTCAAAGTGGTTTGGAGATGCTGAAAAACTAACCAAAGCGCTTTTCTCATTTGCCAGCAAGCTTGCTCCTGTCATTATATTTGTTGATGAAGTTGACAGTTTGCTTGGTGCTAGAGGTGGTGCTTTTGAGCATGAGGCCACTAGAAGAATGAGGAACGAATTTATGGCAGCCTGGGATGGATTGAGGTCAAAAGAAAACCAACGAATCCTTATTCTAGGAGCAACAAACCGGCCATTTGATCTTGATGATGCTGTTATTCGTCGTTTACCAAGAAGGATATATGTTGATTTACCAGATGCTGAAAATCGAATGAAGATTTTAAGCATCTTTCTAGCACAAGAAAACTTGGATTCTGAATTTCAGTTAGATAAACTTGCTAACATGACTGATGGATACTCGGGCAGTGATTTGAAGAACCTCTGTATTGCTGCAGCGTATAGACCTGTTCAAGAGCTCTTAGAGAATGAAAAGAAGGAAGCCAGTAGTGGTACAACTTCAATATTAAGGCCTCTCAATTTGGATGATTTTGTTCAGTCCAAAACCAAGGTGGGTCCATCGGTTGCGCATGATGCAACAAGCATGACCGAGTTGAGGAAGTGGAACGAAATGTATGGAGAAGGAGGTAACAGGACAAAATCACCATTTGGATTTGGGAGCTGA 3129 0.4046 MYLRRIQCRRDRVWALVLQPSKYFFRPRLSGHQYFQSLSPKTAVEEYASHGRIIPERLLGSYSCKHTSSTISFAAQDKRPSLCHNSTQLRAYSSESDGRNASEDKQVHGSDGTNFDKRQNQQEKFGKEVEYCNAHARLGEQEQEEWLNNERLTIENKRRESPFLTRRDKFKNEFIRRILPWEKIHISWDTFPYHIHENTKNLLVECAASHLRHNKFASTFGIGLSSSSGRILLQSIPGTELYRERLVRALAQDLQVPLLVLDNSILAPYDIDDDLSSDYESDDDNAESGEEGSLESENDDDNEASNEEEWASSTEAKSDASDNEDAVASAEAHLKKVKAAVLRKLVPYNVEEFEKIVAGESESSESSKSNSNDTKSSDKSGCQLKKGDRVKYIGPSVQVTDEDRVILGKIPTSDGPTNAYTIIHGRPLTNGQRGEVYEVNGDRVAVILDINEDKVNEGEVENLSDDHTKPPIYWIHVKDIENDLDAQSQDCYIAVEALCEVLRRKQPLIVYFPDSSHWLHKSVPKSNRNEFFQRVEEMFDQLSGPIILICGQNKVQSGSKEKEQFTMILPNFGRVAKLPLSLKRWTEGIKGDKTSEDDEINKLFSNVLSIHPPKDENQLATFKKQLEEDKKIVTSRSNLSILRKVLEEHQLSCIDLLHLNTDGIVLTKLKAEKVVGWAKNHYLSSCLLPSVKGERLCLPRESLEIAVSRLTSQETMSRKSSQSLKNLAKDEFESNFISSVVPPGEIGVKFDDVGALEDVKKALQELVILPMRRPELFSRGNLLRPCKGILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRSKENQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDAENRMKILSIFLAQENLDSEFQLDKLANMTDGYSGSDLKNLCIAAAYRPVQELLENEKKEASSGTTSILRPLNLDDFVQSKTKVGPSVAHDATSMTELRKWNEMYGEGGNRTKSPFGFGS 1042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02625 1042 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 169 1035 - -
Viun11g02625 1042 MobiDBLite consensus disorder prediction 276 308 - -
Viun11g02625 1042 Gene3D - 748 1023 IPR027417 -
Viun11g02625 1042 Gene3D - 921 1006 - -
Viun11g02625 1042 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 748 978 IPR027417 -
Viun11g02625 1042 MobiDBLite consensus disorder prediction 359 387 - -
Viun11g02625 1042 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 747 923 - -
Viun11g02625 1042 MobiDBLite consensus disorder prediction 310 325 - -
Viun11g02625 1042 Pfam AAA+ lid domain 944 977 IPR041569 -
Viun11g02625 1042 Pfam ATPase family associated with various cellular activities (AAA) 789 919 IPR003959 GO:0005524|GO:0016887
Viun11g02625 1042 MobiDBLite consensus disorder prediction 91 117 - -
Viun11g02625 1042 MobiDBLite consensus disorder prediction 97 117 - -
Viun11g02625 1042 ProSitePatterns AAA-protein family signature. 892 911 IPR003960 GO:0005524|GO:0016887
Viun11g02625 1042 SMART AAA_5 785 922 IPR003593 GO:0016887
Viun11g02625 1042 MobiDBLite consensus disorder prediction 276 325 - -
Viun11g02625 1042 MobiDBLite consensus disorder prediction 362 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02625 Viun-Chr11 39181852 39198121 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02625 748 980 Calmodulin-binding Proteins AT3G56690 39.407 2.93e-41 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02625 - - gmx:100802939 1736.47