Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun11g02600 | ATGAATTCTCGGACAGGCAAGGGACCTGCAGTCAGAAGCTACCGGAGGAGAAAGGCAGTCTTGGACCTTGACCTTAATCGTGTGCCAGCTGGTGACAATCGTGAGCACGAGGGACCTTCAATACAGTTAGGGCCACAAGTAGTTATAGTTGAACAGCAGCCACCGGCCTCTCAGCCGACCATGATTGATGTGGAAGACATTGATGATGATGTTGTTGAATGTACCCCAGGGGCTTTTGCTGAGGCTAAAAACAAATCCAGAAGAAACCGAGGGAGGACTGTAGTTGATGTTGAACTAGAAGATCAGACTCGGCGCAACAAGCGCAGAAGAGAATTGCGAAATCAAACAATTATTAATTGTGAGAAGTATATAAATTTAGAAGGCAGTAGCAGTTCTATGAGTGATAATGCTAAAATGATTCCTGAACCTCGAATTGAGCCTGTTTTCAACTGTCCAATATGTATGGGTCCTTTGGCAGAAGAAATGTCGACAAGGTGTGGTCATATTTTTTGCAAGAATTGCATCAAGGCTGCTATAAGCGCTCAGGGAAAATGCCCTACCTGTAGAAAAAAGATTACTGTGAAAGAGCTTATAAGGGTGTTTCTCCCATCAACTAGTTGA | 621 | 0.4396 | MNSRTGKGPAVRSYRRRKAVLDLDLNRVPAGDNREHEGPSIQLGPQVVIVEQQPPASQPTMIDVEDIDDDVVECTPGAFAEAKNKSRRNRGRTVVDVELEDQTRRNKRRRELRNQTIINCEKYINLEGSSSSMSDNAKMIPEPRIEPVFNCPICMGPLAEEMSTRCGHIFCKNCIKAAISAQGKCPTCRKKITVKELIRVFLPSTS | 206 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun11g02600 | 206 | SMART | ring_2 | 151 | 188 | IPR001841 | - | |
Viun11g02600 | 206 | PANTHER | ELFLESS, ISOFORM B | 4 | 206 | - | - | |
Viun11g02600 | 206 | ProSitePatterns | Zinc finger RING-type signature. | 166 | 175 | IPR017907 | - | |
Viun11g02600 | 206 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 85 | 205 | IPR013083 | - | |
Viun11g02600 | 206 | SUPERFAMILY | RING/U-box | 150 | 195 | - | - | |
Viun11g02600 | 206 | ProSiteProfiles | Zinc finger RING-type profile. | 151 | 189 | IPR001841 | - | |
Viun11g02600 | 206 | Pfam | Zinc finger, C3HC4 type (RING finger) | 150 | 188 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun11g02600 | Viun-Chr11 | 39041659 | 39045858 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun11g02600 | 1 | 205 | C3H Transcription Factor Family | AT5G48655 | 52.358 | 2.27e-54 | 171 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun11g02600 | K22651 | - | gmx:100792853 | 305.064 |