Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02598 ATGGAAGTGATCATGCAACAGCAGCAGCAACAACAGCAACAGCAGAACCCTTCTGCACTGGTGCCACTCTTAAAAAATCCCCAATCCTCCACCTCCAACGTCGCCGCCGCCACCACAACCCCCGCCGCCACTTCCATTAGGTCGCCTTCCTCGCAGTCGCCGCTCTCCGTCGTCGCTCCCCTCCGCCAACCCCCGCTCTCCTCGCATCCGGTGCCAGTTACGGCGGTGGAGCCAACTTTGACGGCGGTGCCGACGTGTCCGCTGGTGAGAGTCCGCCTCTCGGACATTGCCCCCTATGACGGGGCGCCGGCGGGGCCGTATCTGAGAGCAATGGATGCGCTGTGTGGGTCTCTGCTGCGGCACAATGCCGCGTTGATCGAATTGGGGAGCGAGGACACTGCTCTGATGCGATGCGGCTTGGAAGGTGCACGGTTGTTTTTCAGAAGTAGGGCTCAACTTGGTGTTGGGAAGGGTAGCCGTGGGGTTTACATGTACAGAGCAGGAAGGGCTTTGGAGGATTGGGATTATTCTCCCCCCTGCATGGCTGATATTTATAGATGCATGGGAAAGGCGTCTCGATCTGCCTTGAGTGCCATTGCAAGATACTTACGTCTTAGAAGCGACGTTTTTAACCATTTGCTCGATGATTCTCCATTGCCTGCTAATGAGGTGTCATCCTCAGTTCTTGTTGCGACATACTCAAATTCTTCTTTGCAAAATGGAAGAGGTGCAATTGGAGGTGGTAAGCCTACCATGAATGGTGAAGTTGAAAAGGGATTGTTGACGTTGATATCTTCTGACACTCCTGGTCTTCAGATATGTGACCCCAGTGGGCGCTGGTATCTGGCAGACAGTGGTTCTGGGCCCGGAGATCTTTTACTGATAACTGGCAAGGCACTTAGTCATGCTACTGCTGGTCTACGTCCTGCAGCGTCATATAGAGCTTCTCCTGATTATTTTCTGAGTCCTAATGGTGGAGGAAGGACTTCTCTTGCATATAGACTCATGCCACTGGGCAATGCTATATTAGATTGTTCCCCAATAGCAGCAGCTGGTCATATTATTCCCCAAAGCTATGTTCGAATTTCTGTAAGCCAATTTATGGATGACCTTGCTGCTGAAGAATTGATAGGGAGCAGATGTGATAATGCTGATGTTGCTGCTCAAAACAGTATGAACAAGGAGCCATCATTAAGAAGTGTTCTATCAGATCCTTTATCTGGCACATTCCTTGAAGATGCCATGTTTGTCTCATGTGGACATTCTTTTGGTGGTCTCATGCTGAGGAGAGTTATTGAAACATCCAGATGTACTCTCTGCAATACCGAAATTGAAACTGGTTCTTTGATCCCTAATCTTGCTCTTAGAGCTGCAGCTGGTGCTGTCAAGCATGAGGATGAACGGAGGTTATTTCGTAATGCTGCTCTTCGAAAGCGGCGGAAAGAAATGGGTGACCAAATGGATTCAATGAGAAGAGTGAACAGGGAAAATGGAGATTATAGTGCTCCTGATGGACTTCAGCGGGGAGTGCAATATCCATTTTCGGTAAATGAGAAAGTTATTATAAAGGGTAACAGAAGAACACCAGAAAAATTTGTTGGGAAAGAAGCTGTGATTACATCTCAATGCCTCAATGGCTGGTATTTGCTCAAGATTATTGAAACTGGAGAGAATGTCCGCCTGCAGTACCGTTCTCTTAGGAAGCTCTTAACAGCGGACCAGTGTCCCTCACAACCAATTCAAAATAGCAGCTCTTAA 1758 0.4875 MEVIMQQQQQQQQQQNPSALVPLLKNPQSSTSNVAAATTTPAATSIRSPSSQSPLSVVAPLRQPPLSSHPVPVTAVEPTLTAVPTCPLVRVRLSDIAPYDGAPAGPYLRAMDALCGSLLRHNAALIELGSEDTALMRCGLEGARLFFRSRAQLGVGKGSRGVYMYRAGRALEDWDYSPPCMADIYRCMGKASRSALSAIARYLRLRSDVFNHLLDDSPLPANEVSSSVLVATYSNSSLQNGRGAIGGGKPTMNGEVEKGLLTLISSDTPGLQICDPSGRWYLADSGSGPGDLLLITGKALSHATAGLRPAASYRASPDYFLSPNGGGRTSLAYRLMPLGNAILDCSPIAAAGHIIPQSYVRISVSQFMDDLAAEELIGSRCDNADVAAQNSMNKEPSLRSVLSDPLSGTFLEDAMFVSCGHSFGGLMLRRVIETSRCTLCNTEIETGSLIPNLALRAAAGAVKHEDERRLFRNAALRKRRKEMGDQMDSMRRVNRENGDYSAPDGLQRGVQYPFSVNEKVIIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIETGENVRLQYRSLRKLLTADQCPSQPIQNSSS 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02598 585 SUPERFAMILY Clavaminate synthase-like 179 347 - -
Viun11g02598 585 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 86 583 - -
Viun11g02598 585 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 397 466 IPR013083 -
Viun11g02598 585 MobiDBLite consensus disorder prediction 1 57 - -
Viun11g02598 585 Gene3D - 170 376 IPR027443 -
Viun11g02598 585 SUPERFAMILY RING/U-box 398 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02598 Viun-Chr11 39016159 39025793 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02598 398 568 Plant U-box Gene Family AT5G05230 40.936 5.40e-38 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02598 - - gmx:100807199 1017.68