Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02582 ATGGAGAGATCCTATGTTTTTGTTTTTCTCTGTGTCTCCGTGCTTTGTCTCTTCCTGTCCGAACCCACCAGAGCAGAAGACGATTCCCGACCACTACTCGCTCTCAAATCCTCCATTGACGTTCTCCACAAGCTCCCATGGCGGCAAGGAGCCGACGTGTGCACCTGGGAAGGGGTAAAAGACTGCTTCAACGGAAGAGTCAGAAAGCTCGTTCTGGAACACTCCAACCTAACGGGTTCTCTGGATGCCAAGATCTTGAACCGTTTGGACCAGCTCCGAGTCCTCAGCTTCAAAGGAAACTCACTCTCCGGCCAAGTCCCTGACCTCTCCGCCTTGATCAACCTCAAATCGATTTTCCTCAACGACAACAACTTCTCCGGCGAGTTCCCCTCCTCGGTCGCGCTGCTCCACCGCGTCAAGGTCATTGTCCTATCGCAGAACCACATCACCGGCGACATTCCACCGTCGCTACTCAATCTCCGGCGACTCTACATCCTCTACCTCGAAGACAACGCTTTCACGGGAAGCATCCCGGCTTTCAACCAAACCAGCCTCAGGTATTTCAACGTCTCCAACAACCGACTCTCCGGCGAGATTCCGGTGACCGCCGCACTGATCCGGTTCAATGCGTCGTCGTTTTCAGGCAACCCGGGGCTCTGCGGGGAGAACATCCTCCAACCGTGCAAAAACGGCACCGCTCCGTCGGCGCCGCCGATAAGCCCCAGCTATCCGCTGATCCCGGGAGGCGCCGCGACGGCGCCGACATCATCGAACCGCACCAAACTGATAAAGATAATCGGAGGGTGCGTTGGTGGCGTTGTTTTCATACTGCTGTGCATGGCTGTGGTGTGGGCGATTTGCAGGAAGCGGAAGACGAGGGTTGGTTCCGGAACGAGGAGCAAGGGCGGTGCTGACGTGGCAGAGGGGGAGGCTGGTGCGGCGGGCAGTACCGGCGGTGGCGGCGGCGGCGAGGGTGGGGACAGTAACAAACAAGGTGGTTTTGCGTGGGAAGGTGAGGGTCTAGGGAAGCTGGTGTTCTGCGGAGGAGGTGATCGCGAGATGAGTTATAGTTTAGAAGATTTGCTGAAGGCTTCGGCGGAGACTTTGGGGAGGGGTATTATCGGAAGTACATATAAAGCAGTTATGGAATCAGGGTTCATTGTTACTGTTAAGAGGTTGAAGGATGCAAGATACCCTGGTTTGGAAGAATTCAGAGCTCACATTCATGTTCTTGGGAGGCTCACTCACCCTAACCTGGTCCCACTCAGGGCCTATTTTCAGGCTAAGGAAGAACGTCTTCTCGTTTATGATTACTTCCCCAATGGAAGCCTCTTCTCCCTTATTCACGGATCAAAAACATCTGGCGGAGGAAAACCTCTTCACTGGACATCCTGCCTTAAGATTGCCGAAGATCTAGCAACAGGTCTGCTCTATATCCACCAGAACCCCGGCATGACACATGGAAACCTTAAATCTTCTAATGTGTTGCTTGGCTCTGATTTTGAGTCATGTCTTACTGATTACGGTCTCACTGTTTTCCTAAACCCTGACTCAATGGACGAGCCAAGTGCCACATCTTTATTCTACAGAGCACCCGAATGCCGCAACTTTCAAAGGTCACAAACTCAACCAGCTGATGTATACAGCTTTGGGGTCCTTGTTCTAGAGCTTTTAACAGGGAAAACACCCTTCCAAGACCTTGTTCAGACGTATGGTTCAGACATACCTAAGTGGGTCCGGTCGGTGCGCGAAGAAGAGACTGAGTCCGGTGATGATCCTGCCTCAGGCAATGAAGCATCAGAAGAGAAGCTTCAGGCTCTTCTGAACATTGCCATGGCATGTGTTTCACTGGTGCCGGAGAACAGACCTACAATGAGAGAGGTTTTAAAGATGATAAGAGATGCAAGAGGAGAGGCGCATGTTTCATCTAACAGTAGTGATCACTCTCCTGGTAGATGGTCAGATACTGTTCAAAGCTTTCCCAGGGAAGAACACCAGAGCATATGA 2007 0.5227 MERSYVFVFLCVSVLCLFLSEPTRAEDDSRPLLALKSSIDVLHKLPWRQGADVCTWEGVKDCFNGRVRKLVLEHSNLTGSLDAKILNRLDQLRVLSFKGNSLSGQVPDLSALINLKSIFLNDNNFSGEFPSSVALLHRVKVIVLSQNHITGDIPPSLLNLRRLYILYLEDNAFTGSIPAFNQTSLRYFNVSNNRLSGEIPVTAALIRFNASSFSGNPGLCGENILQPCKNGTAPSAPPISPSYPLIPGGAATAPTSSNRTKLIKIIGGCVGGVVFILLCMAVVWAICRKRKTRVGSGTRSKGGADVAEGEAGAAGSTGGGGGGEGGDSNKQGGFAWEGEGLGKLVFCGGGDREMSYSLEDLLKASAETLGRGIIGSTYKAVMESGFIVTVKRLKDARYPGLEEFRAHIHVLGRLTHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLIHGSKTSGGGKPLHWTSCLKIAEDLATGLLYIHQNPGMTHGNLKSSNVLLGSDFESCLTDYGLTVFLNPDSMDEPSATSLFYRAPECRNFQRSQTQPADVYSFGVLVLELLTGKTPFQDLVQTYGSDIPKWVRSVREEETESGDDPASGNEASEEKLQALLNIAMACVSLVPENRPTMREVLKMIRDARGEAHVSSNSSDHSPGRWSDTVQSFPREEHQSI 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02582 668 Gene3D Phosphorylase Kinase; domain 1 350 438 - -
Viun11g02582 668 SUPERFAMILY L domain-like 51 223 - -
Viun11g02582 668 MobiDBLite consensus disorder prediction 642 668 - -
Viun11g02582 668 Pfam Leucine rich repeat N-terminal domain 26 59 IPR013210 -
Viun11g02582 668 Pfam Protein kinase domain 366 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g02582 668 Gene3D Ribonuclease Inhibitor 182 232 IPR032675 -
Viun11g02582 668 MobiDBLite consensus disorder prediction 294 332 - -
Viun11g02582 668 ProSiteProfiles Protein kinase domain profile. 363 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g02582 668 SUPERFAMILY Protein kinase-like (PK-like) 367 643 IPR011009 -
Viun11g02582 668 MobiDBLite consensus disorder prediction 639 668 - -
Viun11g02582 668 Gene3D Transferase(Phosphotransferase) domain 1 439 655 - -
Viun11g02582 668 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 107 199 - -
Viun11g02582 668 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 13 637 IPR046959 -
Viun11g02582 668 Gene3D Ribonuclease Inhibitor 25 181 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02582 Viun-Chr11 38952754 38959592 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02582 14 668 Receptor kinase-like Gene Family AT1G60630 61.876 0.0 774
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Viun11g02582 Pkinase 1.2e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02582 - - gmx:100809866 1087.79