Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02579 ATGGCGGCTACTGTGTCTGCGTGGTCAAAGCCCGGCGCGTGGGCCATCGATTCCGAGGAACACGAGGCTGAACTCCTTCAACAGAACCCAATCCAAGAGACCACCAAACCTCTCGCCGACTTCCCCTCCCTCGCCGTCGCCGCCGCCACAAAGCCCAAGAAGAAGAAGGCCCAGACCTACTCCCTCGCAGAGTTCACTGCCAAGCCCGACACCTCCTTCGCCGACCAAGATCCCGTCGTCCTCCCCACCGGCCCGCGCCAGCGCACCGCCGAGGAGCTCGACCGCACCCGTCTAGGTGGAGGCTTCCGGTCCTACGGTGACCGCCCTAACAGGAATTCCTCGGGAGACGACTCGTCGAATTCGCGTTGGGGTTCATCTAGGGTTTCTGACGAGCCCAGGAGAAACGGTTCCTTTGGGGCTAGGGATTCCAATCGCGAGCTTCCCCCTTCTCGCGCTGACGAGACTGATAATTGGGCGGCGGCAAAGAAACCCTCGGGAGGGTTTGAGAGGAGGGAGAGGGATAAGGGAGGGTTCTTCGATTCGCAGTCGCGCGCTGACGAATCGGACAGCTGGGTTTCGAATAAGAGCTTTGTGCCGTCGGAGCGGCGATTCGGCTCCAACGGTGGAGGGTTTGAGAGAGAGAGGAGGGTTGTTGGGTTTGGCTCCAGCGGCGGCGCTGATTCAAATGACTGGAACAAGAAGAAGGGCGAAACAAACGTTGGTAGCGAGAGTGTCGGTGTCGGTGCCGGTGCTGGTGCTGGTGCTGGTGCTGGTGGAGGCAGACCAAGGCTTGTTCTGCAACCTCGGTCTCTGTCGGTGAGCAATGAAGGACAGGATGCGAATGTGGGGAAGCCAAAAGGGGTTAATCCGTTCGGAGAAGCAAGGCCAAGGGAGCAGGTTTTGGCGGAGAAAGGGCAAGATTGGAAAAAGATTGATGAACAGCTTGAGAGCATGAAGATTAAGGAGACAGGTGCAGGTGATTCCTTTGTGAAAAGGGGTTTTGGGTCTCCCAATGGTGGAGGACGAGCTGCTTTGCCTGAAAGTCGCACTGAGAGGAGTTGGAGGAAGCCCGCATCTGATGATGAACGTCCTAAAAGTGCTGAAAAAGTTGAAGATAAAGCCGTTGAAGAAAATTGA 1137 0.5717 MAATVSAWSKPGAWAIDSEEHEAELLQQNPIQETTKPLADFPSLAVAAATKPKKKKAQTYSLAEFTAKPDTSFADQDPVVLPTGPRQRTAEELDRTRLGGGFRSYGDRPNRNSSGDDSSNSRWGSSRVSDEPRRNGSFGARDSNRELPPSRADETDNWAAAKKPSGGFERRERDKGGFFDSQSRADESDSWVSNKSFVPSERRFGSNGGGFERERRVVGFGSSGGADSNDWNKKKGETNVGSESVGVGAGAGAGAGAGGGRPRLVLQPRSLSVSNEGQDANVGKPKGVNPFGEARPREQVLAEKGQDWKKIDEQLESMKIKETGAGDSFVKRGFGSPNGGGRAALPESRTERSWRKPASDDERPKSAEKVEDKAVEEN 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02579 378 MobiDBLite consensus disorder prediction 165 182 - -
Viun11g02579 378 Pfam Plant specific eukaryotic initiation factor 4B 7 321 IPR010433 GO:0003743
Viun11g02579 378 MobiDBLite consensus disorder prediction 107 132 - -
Viun11g02579 378 MobiDBLite consensus disorder prediction 183 201 - -
Viun11g02579 378 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 367 IPR010433 GO:0003743
Viun11g02579 378 MobiDBLite consensus disorder prediction 319 378 - -
Viun11g02579 378 MobiDBLite consensus disorder prediction 65 296 - -
Viun11g02579 378 MobiDBLite consensus disorder prediction 348 378 - -
Viun11g02579 378 MobiDBLite consensus disorder prediction 134 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02579 Viun-Chr11 38932511 38934886 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02579 1 356 Eukaryotic Initiation Factors Gene Family AT4G38710 50.246 1.62e-63 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02579 - - pvu:PHAVU_011G033300g 642.114