Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02570 ATGGGCACCGCAACCGTCTTTTCGTCTCCCACTGTTTCAACCACCGGTAAATGGCTGGGCTTCGTGGCCGCCGTCTGGATTCAGTGCATCTCCGGCAACAACTACACCTTCTCCAATTACTCCGACGCGCTGAAATCACTCATGCATCTCACGCAGGTGCAACTCAACAACCTCTCCGTCGCTAAAGACATCGGAAAAGCCTTTGGGCTTCTCGCGGGCCTCGCCTCCGACCGCTTTCCGACTTGGGCCATTCTCCTGATAGGCTCCGTGGAAGGCCTGATAGGGTACGGAGTCCAATGGCTCGTTGTCAGCCAGAGAATCCAGCCCCTTCCGTATTGGCAGATGTGTGTGTTTCTGTGCATGGGAGGGAACAGCTCGACGTGGATGAACACTGCCGTTTTGGTAACGTGCATACGCAACTTCCGGACAAACAGAGGACCCGTTTCGGGGATTTTGAAAGGCTTTGTAGGGTTGAGCACTGCGATATTCACTACGCTCTGTTCTGCGCTTTTCGCCGACGACCCTGCCTCCTTCCTCGTCATGCTCTCTCTCGTTCCCCTCGTCGTTTGTCTCACCGGTATCTTTTTCCTCCGAGAGCTTCCTCCCGCCGTCGCCGCCGCCGGAAGCGCCGAGGAGGTCAGGTATTTCGGCGTCTTCAACGTCGTTGCCGTCGTCGTCGCTCTCTTCCTTTTGGTGTATGGCTTCGTCCCCAGCCCTGGGGTCCTGGTGTCGCGGGTGTTCGTCGCCGTTTTGCTCGTTATACTGGCTTCGCCGGTGGGGATTCCGGTGTACACGTACTTCAAGGGACGGCTCGGAGCGGGGAATGACGTGGAGGGGCAGAGAGCGAGTGAACCGTTGCTTCGGAGTGGGGAAAAGGAAAACGAAAGCGTGGCGGCGGTGGCGGCGGTGGAAGAGGAGGCTTTCGTGGAGAAGAGAGCGCCGGAGGTGGGTGAAGAGCACACGATAATGGAGGTGCTGAAGAGCGTGGATTTTTGGATCTTGTTCGTGTCGTTTCTCTGCGGGGTTGGAACCGGTTTGGCTGTGATGAACAATATGGGTCAAATCGGGTTGGCTCTCGGGTACCCGGATGTCTCACTTTTCGTCTCTTTGACGAGTATTTTCGGATTCTTTGGACGGATCATCTCGGGTACCGTTTCCGAGTTCACCATCAAAAAAGCAGCAACACCAAGACCTCTTTGGAATGCAGCATCTCAGCTTCTAATGGCTGTTGGTTACATACTGATGGCCATGGCTATGCCAGGTTCTCTATACATTGGATCAATTTTAGTTGGGATATGTTATGGGGTTAGGCTTGCAATCACAGTTCCAACAGCCTCGGAGTTATTTGGTCTGAAATACTATGGTCTCATCTACAACATTCTCATCCTTAACCTTCCTCTGGGCTCTTTCCTTTTCTCTGGTTTGCTTGCTGGCATACTGTATGACATGGAAGCAACGACAACTGAGGGAGGAGGCAACACCTGTGTCGGAGGTCACTGTTACAGACTCGTCTTTGTAGTCATGACAGGAGCATGTGTTGTTGGCTTCTTCTTAGACATTCTCTTGTCCTTCAGAACCAAAACTGTTTACACAAAGATTTCCATGAGCAAGAAACCCAACAAATCCTTATCAGCATCATCAAGTAGCCGTTGA 1653 0.5281 MGTATVFSSPTVSTTGKWLGFVAAVWIQCISGNNYTFSNYSDALKSLMHLTQVQLNNLSVAKDIGKAFGLLAGLASDRFPTWAILLIGSVEGLIGYGVQWLVVSQRIQPLPYWQMCVFLCMGGNSSTWMNTAVLVTCIRNFRTNRGPVSGILKGFVGLSTAIFTTLCSALFADDPASFLVMLSLVPLVVCLTGIFFLRELPPAVAAAGSAEEVRYFGVFNVVAVVVALFLLVYGFVPSPGVLVSRVFVAVLLVILASPVGIPVYTYFKGRLGAGNDVEGQRASEPLLRSGEKENESVAAVAAVEEEAFVEKRAPEVGEEHTIMEVLKSVDFWILFVSFLCGVGTGLAVMNNMGQIGLALGYPDVSLFVSLTSIFGFFGRIISGTVSEFTIKKAATPRPLWNAASQLLMAVGYILMAMAMPGSLYIGSILVGICYGVRLAITVPTASELFGLKYYGLIYNILILNLPLGSFLFSGLLAGILYDMEATTTEGGGNTCVGGHCYRLVFVVMTGACVVGFFLDILLSFRTKTVYTKISMSKKPNKSLSASSSSR 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02570 550 Gene3D MFS general substrate transporter like domains 296 545 IPR036259 -
Viun11g02570 550 Gene3D MFS general substrate transporter like domains 16 208 IPR036259 -
Viun11g02570 550 SUPERFAMILY MFS general substrate transporter 32 527 IPR036259 -
Viun11g02570 550 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 18 531 - -
Viun11g02570 550 Pfam Nodulin-like 17 263 IPR010658 -
Viun11g02570 550 CDD MFS_Mch1p_like 16 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02570 Viun-Chr11 38864306 38867356 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02570 17 542 Nodulin-like Gene Family AT4G34950 68.978 0.0 767
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02570 - - gmx:100800237 871.692