Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02569 ATGGGCACCGCAACCGTCTTTTCGTCTCCCACTGTTTCAACCACCGGTAAATGGCTGGGCTTCGTGGCCGCCGTCTGGATTCAGTGCATCTCCGGCAACAACTACACCTTCTCCAATTACTCCGACGCGCTGAAATCACTCATGCATCTCACGCAGGTGCAACTCAACAACCTCTCCGTCGCTAAAGACATCGGAAAAGCCTTTGGGCTTCTCGCGGGCCTCGCCTCCGACCGCTTTCCGACTTGGGCCATTCTCCTGATAGGCTCCGTGGAAGGCCTGATAGGGTACGGAGTCCAATGGCTCGTTGTCAGCCAGAGAATCCAGCCCCTTCCGTATTGGCAGATGTGTGTGTTTCTGTGCATGGGAGGGAACAGCTCGACGTGGATGAACACTGCCGTTTTGGTAACGTGCATACGCAACTTCCGGACAAACAGAGGACCCGTTTCGGGGATTTTGAAAGGCTTTGTAGGGTTGAGCACTGCGATATTCACTACGCTCTGTTCTGCGCTTTTCGCCGACGACCCTGCCTCCTTCCTCGTCATGCTCTCTCTCGTTCCCCTCGTCGTTTGTCTCACCGGTATCTTTTTCCTCCGAGAGCTTCCTCCCGCCGTCGCCGCCGCCGGAAGCGCCGAGGAGGTCAGGTATTTCGGCGTCTTCAACGTCGTTGCCGTCGTCGTCGCTCTCTTCCTTTTGGTGTATGGCTTCGTCCCCAGCCCTGGGGTCCTGGTGTCGCGGGTGTTCGTCGCCGTTTTGCTCGTTATACTGGCTTCGCCGGTGGGGATTCCGGTGTACACGTACTTCAAGGGACGGCTCGGAGCGGGGAATGACGTGGAGGGGCAGAGAGCGAGTGAACCGTTGCTTCGGAGTGGGGAAAAGGAAAACGAAAGCGTGGCGGCGGTGGCGGCGGTGGAAGAGGAGGCTTTCGTGGAGAAGAGAGCGCCGGAGGTGGGTGAAGAGCACACGATAATGGAGGTGCTGAAGAGCGTGGATTTTTGGATCTTGTTCGTGTCGTTTCTCTGCGGGGTTGGAACCGGTTTGGCTGTGATGAACAATATGGGTCAAATCGGGTTGGCTCTCGGGTACCCGGATGTCTCACTTTTCGTCTCTTTGACGAGTATTTTCGGATTCTTTGGACGGATCATCTCGGGTACCGTTTCCGAGTTCACCATCAAGTAA 1176 0.5638 MGTATVFSSPTVSTTGKWLGFVAAVWIQCISGNNYTFSNYSDALKSLMHLTQVQLNNLSVAKDIGKAFGLLAGLASDRFPTWAILLIGSVEGLIGYGVQWLVVSQRIQPLPYWQMCVFLCMGGNSSTWMNTAVLVTCIRNFRTNRGPVSGILKGFVGLSTAIFTTLCSALFADDPASFLVMLSLVPLVVCLTGIFFLRELPPAVAAAGSAEEVRYFGVFNVVAVVVALFLLVYGFVPSPGVLVSRVFVAVLLVILASPVGIPVYTYFKGRLGAGNDVEGQRASEPLLRSGEKENESVAAVAAVEEEAFVEKRAPEVGEEHTIMEVLKSVDFWILFVSFLCGVGTGLAVMNNMGQIGLALGYPDVSLFVSLTSIFGFFGRIISGTVSEFTIK 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02569 391 Gene3D MFS general substrate transporter like domains 14 217 IPR036259 -
Viun11g02569 391 SUPERFAMILY MFS general substrate transporter 31 387 IPR036259 -
Viun11g02569 391 Pfam Nodulin-like 17 263 IPR010658 -
Viun11g02569 391 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 18 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02569 Viun-Chr11 38864297 38866741 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02569 17 391 Nodulin-like Gene Family AT4G34950 66.247 0.0 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02569 - - gmx:100800237 625.55