Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02540 ATGATGGGTATTCGTTTGCCGTTTCTTGTTAATGCAAAACACACGTCGTTGAAGTCCAACAATGTTCCAAAGGGTCACGTTGCAGTTTACGTCGGAGATCTCGAAAAGAAGAGGTTTGTGGTTCCGATATCATATTTGAAGCACCCCTTGTTTCTTGATTTGCTGAACCGAGCAGAAGAAGAGTTTGGGTTCAACCATCCCATGGGAGGCCTCACCATTCCTTGCAAAGAAGAAGCTTTCATCAATCTCACTTCTCAAATGCGTGCCTTCTCAGACAGACACCATTGTTAA 291 0.4399 MMGIRLPFLVNAKHTSLKSNNVPKGHVAVYVGDLEKKRFVVPISYLKHPLFLDLLNRAEEEFGFNHPMGGLTIPCKEEAFINLTSQMRAFSDRHHC 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02540 96 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 15 86 IPR003676 GO:0009733
Viun11g02540 96 Pfam Auxin responsive protein 16 84 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02540 Viun-Chr11 38682380 38682810 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02540 21 80 Calmodulin-binding Proteins AT5G20810 60.000 1.46e-17 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02540 K14488 - gmx:100803474 154.451