Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02539 ATGAAGACTGGTAACAGATTTGTGGGGATAGCCAATGCCAAGCACAAACTTCAGAGAACTCTTTCACAGAGAATCAAAATGGCTTCTTCTGTCGCTGATGTTCCAAAAGGGCACTTGGCAGTGTACGTTGGAGAGAATCATAAGAGGTTTGTGATTCCAATATCTTACCTGAGCCACCCTTTGTTCAGAGACTTGTTGGATTGGGCTGAAGAAGAATTCGGATTCAATCACCCGATGGGTGGTCTCACTATTCCATGCACTGAACATTACTTCGTTACTCTAACTTCTTCTCTTAGTTAA 300 0.4267 MKTGNRFVGIANAKHKLQRTLSQRIKMASSVADVPKGHLAVYVGENHKRFVIPISYLSHPLFRDLLDWAEEEFGFNHPMGGLTIPCTEHYFVTLTSSLS 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02539 99 Pfam Auxin responsive protein 22 97 IPR003676 GO:0009733
Viun11g02539 99 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 23 98 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02539 Viun-Chr11 38668649 38669593 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02539 33 91 Calmodulin-binding Proteins AT5G20810 64.407 2.69e-20 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02539 K14488 - gmx:100781277 193.356