Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02538 ATGGGCTTTCGCTTACCCGGTATTAGAAGATCATCTTTTGCTGTTACCAAAGCAGCTTCCAAGAGTGTGGAGGTTCCAAAAGGCTATCTTGCAGTCTATGTTGGAGAGAAAATGAAGCGGTTCTTCATTCCCATTTCGTACTTGAATCAACCTTTATTTCAAGAATTATTGAGCCAAGCTGAGGAAGAATTCGGGTATGAACATCCAATGGGTGGTATCACAATTCCTTGCAGGGAAGAGGCTTTCTTAGATCTCACTTCTCGTTTGAATAGGCTATAA 279 0.4158 MGFRLPGIRRSSFAVTKAASKSVEVPKGYLAVYVGEKMKRFFIPISYLNQPLFQELLSQAEEEFGYEHPMGGITIPCREEAFLDLTSRLNRL 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02538 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 18 89 IPR003676 GO:0009733
Viun11g02538 92 Pfam Auxin responsive protein 14 88 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02538 Viun-Chr11 38663253 38663758 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02538 24 82 Calmodulin-binding Proteins AT3G43120 55.932 4.35e-19 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02538 - K14488 gmx:100806671 172.94