Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02537 ATGGGTTTTCGTTTACTTGGTATCAGAAAGGCATCCCTTCCAGCAATCCAAGCATCTTCAAAAGCTGTGGACGTGCCAAAGGGTTACCTTGCAGTCTATGTTGGAGATAAAATGAAGCGGTTTATAATCCCTGTATCATGCTTGAACCAACCTGCATTTCAAGAATTGTTGAGTCAAACCGAGGAAGAATTTGGGTATGAACATCCAATGGGTGGTCTCACAATTCCATTTCAGAACATTCTCTTTTCAAAGTCTCATCACATAACGATGGGTTTTCGTTTACTTGGTATCAGAAAGGCAACATTCACACGAAGCCAAGTATCTTCAAAAGCAGTGAACACACCGAAGGGCTACCTAGCAGTTTATGTCGGAGAGAAAATGAAGAGATTTGTGATCCCCACATCATACTTGAAGCAAACATCATTTCAAGAATTGTTGATTCTTGCCGAGGAAGAATTTGGATATAAACATCCAATGGGTGGTCTTACAATTCCTTGCAGAGAAGAAGAGTTCTTAGATATCACTTCTCGTTTGAACTAA 540 0.4019 MGFRLLGIRKASLPAIQASSKAVDVPKGYLAVYVGDKMKRFIIPVSCLNQPAFQELLSQTEEEFGYEHPMGGLTIPFQNILFSKSHHITMGFRLLGIRKATFTRSQVSSKAVNTPKGYLAVYVGEKMKRFVIPTSYLKQTSFQELLILAEEEFGYKHPMGGLTIPCREEEFLDITSRLN 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02537 179 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 106 178 IPR003676 GO:0009733
Viun11g02537 179 Pfam Auxin responsive protein 101 177 IPR003676 GO:0009733
Viun11g02537 179 Pfam Auxin responsive protein 17 84 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02537 Viun-Chr11 38650477 38654402 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02537 4 78 Calmodulin-binding Proteins AT3G43120 44.872 5.41e-15 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02537 - K14488 aip:110269930 246.128