Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02536 ATGGGTTTCCGTTTACTTGGTATTCGACAGGCATCATCCACAGCTAGGCAAGCAGCTTCAAAATCGGTAGAAGTCCCAAAGGGATATCTTGCAGTGTATGTTGGAGAGAAACAGAAGCGGTTTCTGATTCCAATATCGTATTTGAACCAACCTTCCTTCCAAGATTTATTGAGTCAAGCTGAGGAAGAGTTTGGATATGATCATCCCATGGGTGGCCTCACAATTCCTTGCAATGAAGAACTATTCCAGCATAGAACTTCTTGCTTGAAGGGGCAATAA 279 0.4301 MGFRLLGIRQASSTARQAASKSVEVPKGYLAVYVGEKQKRFLIPISYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCNEELFQHRTSCLKGQ 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02536 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 18 89 IPR003676 GO:0009733
Viun11g02536 92 Pfam Auxin responsive protein 12 88 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02536 Viun-Chr11 38647821 38648625 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02536 4 92 Calmodulin-binding Proteins AT3G43120 44.565 5.06e-22 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02536 K14488 - gmx:100820621 149.443