Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02535 ATGGGATTCCGCTTACCTGGTATCAGAAAGACATCATTTGCTACAAACCAAGCATCTTCCAAGGATGTGGCAAAGGGCCACCTCGCAGTCTATGTTGGAGAGAAAATGAAGCGGTTTGTGATCCCTGTATCACTTTTGAACCAACCTTCGTTTCAAGACTTGTTGAGTCAAGCAGTGGAAGAATTTGGGTATGATCACCCGATGGGTGGTCTCACGATTCCTTGTGGAGAACACGAGTTCTTGGATATCACTTCTCGCTTGATGAGGTGCTAA 273 0.4579 MGFRLPGIRKTSFATNQASSKDVAKGHLAVYVGEKMKRFVIPVSLLNQPSFQDLLSQAVEEFGYDHPMGGLTIPCGEHEFLDITSRLMRC 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02535 90 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 16 87 IPR003676 GO:0009733
Viun11g02535 90 Pfam Auxin responsive protein 15 86 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02535 Viun-Chr11 38647026 38647575 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02535 14 90 Calmodulin-binding Proteins AT4G34750 42.857 2.50e-16 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02535 K14488 - gmx:112998524 143.665