Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02534 ATGGGTTTTCGTTTACCCGGAATTAGAAAGGCATCCCTTCCAGCAATCCAAGCATCTTCAAAAGCAGTTGACGTGGCAAAGGGTTACCTTGCCGTCTATGTTGGAGATAAAATGAAGCGGTTTATTGTCCCTGTATCATACTTGAACCAACCTTCATTTCAAGATTTGTTGAGTCAAAGTGAGGAAGAATTTGGGTATGACCATCCAATGGGTGGTCTCACTATTCCTTGCAGAGAAGATATGTTCTTCGATATCATTCGCTTGATGAAGTGCTAA 276 0.4167 MGFRLPGIRKASLPAIQASSKAVDVAKGYLAVYVGDKMKRFIVPVSYLNQPSFQDLLSQSEEEFGYDHPMGGLTIPCREDMFFDIIRLMKC 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02534 91 Pfam Auxin responsive protein 15 88 IPR003676 GO:0009733
Viun11g02534 91 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 17 86 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02534 Viun-Chr11 38644320 38645532 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02534 17 91 Calmodulin-binding Proteins AT3G43120 48.000 2.06e-18 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02534 K14488 - gmx:100795597 154.066