Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02532 ATGGGTTTTCGTTTACTCGGTATCAGAAAGGCATCTTCAAAAGCTGTGGATGTGCCAAAGGGTTACATTGCAGTCTATGTTGGAGATCAAAGGAAGCGGTTTATGATCCCTGTATCATACTTGAACCAACCTTCATTTCAAGATCTTTTGAGTCAAGCTGAGGAAGAATTTGGCTATGACCATCCAACTGGTGGTCTCACAATTCCTTGTGGAGAAGATGTGTTCTCAGATATCACTTCTCGCTTCAATAGCTGCTAA 258 0.4186 MGFRLLGIRKASSKAVDVPKGYIAVYVGDQRKRFMIPVSYLNQPSFQDLLSQAEEEFGYDHPTGGLTIPCGEDVFSDITSRFNSC 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02532 85 Pfam Auxin responsive protein 12 80 IPR003676 GO:0009733
Viun11g02532 85 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 11 81 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02532 Viun-Chr11 38626553 38627379 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02532 17 75 Calmodulin-binding Proteins AT3G43120 55.932 5.31e-19 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02532 K14488 - gmx:113001963 137.887