Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02531 ATGGGTTTTCGTTTGCCTAGTGTCAAGAAGGCATCCCTTCATACAATCAAAGCATCATCGAAAGCTGTGGACGTGCCGAAGGGCTACCTTGCAGTCTATGTTGGAGAGAAAATGAAGCGATTCATGATTCCTGTATCATTCTTGAACCAACCTTCATTTCAAGATTTGTTGAGTCAAGCCGAGGAAGAATTTGGGTATGACCATCCATTGGGTGGTCTCACAATTCCTTGTGGAGAAGATGTGTTCTTAGATATCACTTCTCGCTTCAATAGCTGCTAA 279 0.4301 MGFRLPSVKKASLHTIKASSKAVDVPKGYLAVYVGEKMKRFMIPVSFLNQPSFQDLLSQAEEEFGYDHPLGGLTIPCGEDVFLDITSRFNSC 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02531 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 15 88 IPR003676 GO:0009733
Viun11g02531 92 Pfam Auxin responsive protein 15 87 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02531 Viun-Chr11 38615805 38616629 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02531 24 82 Calmodulin-binding Proteins AT3G43120 59.322 9.72e-20 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02531 K14488 - gmx:100795597 156.762