Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02530 ATGGGTTTCCTTTTACCATCTATCCGACGGGCTTGGAAATCTGTAGAAGTTCCAAAGGGCTATCTTGCAGTGTACGTTGGAGAGAAAAAGAAGCGGTTTTTGATCCCCTTATCATACTTGAACCAACCTCTATTCCAAGATTTATTGAGTCAAGCTGAAGAAGAGTTTGGATATCATCATCCCATGGGTGGCCTCACAATTCCTTGCAGTGATGATGTCTTCAAACATATAACTCACTGTTTGAGTGGACAATGA 255 0.4157 MGFLLPSIRRAWKSVEVPKGYLAVYVGEKKKRFLIPLSYLNQPLFQDLLSQAEEEFGYHHPMGGLTIPCSDDVFKHITHCLSGQ 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02530 84 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 13 80 IPR003676 GO:0009733
Viun11g02530 84 Pfam Auxin responsive protein 14 81 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02530 Viun-Chr11 38614603 38614980 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02530 16 83 Calmodulin-binding Proteins AT3G43120 51.471 4.87e-20 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02530 K14488 - gmx:100780289 139.043