Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02529 ATGGGTTTTCATTTAGCTGGTATCAGAAAGATGTCTCTTTCAGCTTTCCAAGCATCTTCAAAAGCCATGGATGTGCCAAAGGGCTACCTTCCCGTCTATGTTGGAGAGAAAATGAAGAAGTTCTTCATCCCTGTATCATATTTGAACCAACCTTCATTTCAAGATTTGTTGAGTCAAGCTGAGGAAGAATTTGGTTATAATCATCCAATGGGTGCTCTCACAATTCCTTGCAGAGAAGATGTATTCTTAGATACCACTTCTCGCTTGATTAGGTGCTAG 279 0.4014 MGFHLAGIRKMSLSAFQASSKAMDVPKGYLPVYVGEKMKKFFIPVSYLNQPSFQDLLSQAEEEFGYNHPMGALTIPCREDVFLDTTSRLIRC 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02529 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 17 89 IPR003676 GO:0009733
Viun11g02529 92 Pfam Auxin responsive protein 13 87 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02529 Viun-Chr11 38613461 38613933 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02529 14 82 Calmodulin-binding Proteins AT3G43120 47.826 6.91e-18 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02529 K14488 - gmx:100795597 157.918