Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02528 ATGGGTTTTGGTTTACCTGGTATCAGAAAGGTATTATTTGCAGCCAATCAAGCATCTTCAAAAGCAGTGGATGCACCAAAGGGCTACCTTGCAGTCTATGTTGGAGAGAAGATGAAGCGGCTCATGATCCCTGTTTCTTACTTGAACGAACCTTCATTCCAGGACTTGTTGAGTCAAGTTGAGGAAGAGTATGGATATGAGCATCCCATGGGTGGCCTCACCATTCCTTGCAGTGAAGATGTCTTCCAACATATTACTGGTTGCTTAAATGGACGATAA 279 0.4373 MGFGLPGIRKVLFAANQASSKAVDAPKGYLAVYVGEKMKRLMIPVSYLNEPSFQDLLSQVEEEYGYEHPMGGLTIPCSEDVFQHITGCLNGR 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02528 92 Pfam Auxin responsive protein 16 87 IPR003676 GO:0009733
Viun11g02528 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 18 88 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02528 Viun-Chr11 38609006 38609576 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02528 17 91 Calmodulin-binding Proteins AT3G43120 44.000 5.88e-19 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02528 K14488 - gmx:100820621 169.088