Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02522 ATGGCCATCAGAAAATCAAACAAGCTTCCACAACATGCAGTCTTGAAGCAGATCCTCAAGAGGTGTTCAAGCCTAGGAAAGAAAAACGGGTACGAGGATGATGGCCACCCCGATGATGTCCCAAAAGGCCACTTTGCTGTTTATGTGGGTGAAAACAGAACTAGGTACATTGTGCCAATCTCATTCCTCGCTCACCCTGAGTTCCAATCCCTCCTTCGACAAGCCGAAGAAGAGTTTGGCTTCGATCACGAGATGGGTCTCACCATTCCTTGCGAAGAAGTTGTCTTCAGGTCTCTAACATCCTCGTTGAGATGA 315 0.4762 MAIRKSNKLPQHAVLKQILKRCSSLGKKNGYEDDGHPDDVPKGHFAVYVGENRTRYIVPISFLAHPEFQSLLRQAEEEFGFDHEMGLTIPCEEVVFRSLTSSLR 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02522 104 Pfam Auxin responsive protein 27 103 IPR003676 GO:0009733
Viun11g02522 104 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 37 103 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02522 Viun-Chr11 38588709 38590400 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02522 19 99 Calmodulin-binding Proteins AT3G43120 49.383 2.76e-21 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02522 K14488 - gmx:100790342 204.527