Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02520 ATGTCGCCGTCGACGACCGGGAACTGCAGCAAAATCCGGCGCATTGTGCGCGTGCGGCAAATGCTTCTCCGGTGGCGGAGGAAGGCGCGGCTGGCGGCGTCGGACGTTCCGGCGGGACACGTGGCGGTGTGCGTGGGGCCCAGCCGGAGGAGGTTCATCGTGCGCGCCACCTACCTCAATCATCCGATCTTCAAGACGCTTCTCGCGAAAGCGGAAGAGGAATACGGTTTCTGCAACCACGGTCCTCTCGCTATTCCTTGTGACGAGTCTCTCTTCGAAGAGCTTCTCCGGGTCGTGGACCGACCCGTACCCGGATTGTGCACGCTCGAGGATTTAAGGAGACGGTGCCACGTGGGTGTGTCGAGTGGGAACTCTGAATCGTGGCCGTTGCTCCGTGATGAACTGATCTGCTGA 414 0.6135 MSPSTTGNCSKIRRIVRVRQMLLRWRRKARLAASDVPAGHVAVCVGPSRRRFIVRATYLNHPIFKTLLAKAEEEYGFCNHGPLAIPCDESLFEELLRVVDRPVPGLCTLEDLRRRCHVGVSSGNSESWPLLRDELIC 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02520 137 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 27 95 IPR003676 GO:0009733
Viun11g02520 137 Pfam Auxin responsive protein 24 98 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02520 Viun-Chr11 38574292 38575108 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02520 7 131 Calmodulin-binding Proteins AT4G34750 55.714 3.59e-48 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02520 K14488 - gmx:100795345 211.075
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g02520 11 38574292 38575108 Viun11g02520 11 38574292 38575108 ECH