Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02518 ATGGGTGAAAATGAAGAAGCCACCAATGACATGATGCAGAGGCTTCACTGTTCTTCTTCGTTTCTGAAGCAGCCGTTGAACATGGAGCAACTCAGCATCCCGCAGTTCAATCCCTCGCAAATGCGCGCCAGGCATCAGCATCAGCATCAGTTCGACGGTGGGAACAGTAACAAGCGCGCGGGTATACCACCTTCGCACCCGCACCAGATCCCGCCCATTTCGCCCTACTCTCAGATCCCGGTGACGCGTCAGCAGCAAATGGGGTCGCACAACATTTCCCCTACACCCACCCACACGCGATCACTCTCGCAACCTTCCTTCTTCTCCCTCGATTCCCTTCCTCCTCTCAGCCCTTCCCCCTTCCGAGACTCCTCCTCTACGTCCGTCTCAGAAGCTGCTGACGTGTCCATGGAAGATCGTGACGTCACTTCTCATTCTCTCTTGCCACCCTCGCCTTTCGCCAGAACACTCAACACCTCAACCAACAGCAATTTACCTTTACCCCCTCGCAAAGCGCACAGACGCTCTAACAGTGATATTCCGTTTGGGTTTTCCACCGTTTTGCAATCTTCGCCACCGCTTATTCCTCTCCGGGGCAGAGAAAACCCCGTTTTGGCGAAACCTGCTCAGTTGGTCAAAAGAGAAACACCGTGGGACAGGGGTGTTGACCACAGTAATGTAGAGGGATCCGGGGAGAAGAAATCCCCGGAAGGGGAAGTTGTGGATGATCTTTTCTCTGCTTACATGAATTTAGATAGCTTTGATGCGTTGAACTCTTCTGGAACCGATGACAAAAACGGGACTGAAAACCGTGATGATTTGGATAGTAGAGCGAGTGGGACCAAGACTAATGGTGGTGACAGCAGCGATAATGAAGCTGAGAGCAGTGTTAATGAGAGTGGGGATGGTGCGGTGAGGCAGGGAGGGAGTGAGAAGAGGGAAGGGATGAAGAGGAGTGCGGGTGGGGAGATTGCACCCACCACCAGGCACTATAGGAGTGTGTCCATGGATAGTTTCATTTCGAAATTGAACTTTGGTGATGAGTCGCCGAAGCTGCCACCGTCGCCGGGGCCGAGAACTGGTTTGCTTTCGCCTGCTGGTGGAGTTGATGGCAATTCATCGGCCTTCAGCTTGGAGTTTGGAAATGGGGAGTTTAGTGGGCCTGAATTGAAGAAAATTATGGCCAATGAAAAACTTGCTGAGATTGCCCTGACCGATCCAAAGCGTGCAAAAAGGATTTTGGCCAACCGGCAATCGGCTGCACGGTCCAAAGAGCGGAAGATGCGGTACATATCAGAGCTTGAACATAAGGTTCAGACACTTCAGACGGAAGCCACCACACTATCTGCACAACTTACTCTTTTACAGAGAGATTCTGCTGGACTCACCAACCAGAATAGCGAGTTGAAGTTTCGCCTTCAATCCATGGAACAACAAGCAAAGCTCCGAGATGCTCTAAATGAGGCCCTTACTGCTGAGGTTCAAAGACTAAAGCTTGCTACAGCTGAACTGAGTGGCGATTCACATGGTTCTAGCTGTTTGATTCCCCAGCATTCTGTGAACCCTCTGATGTTCCAGCAGCAGCAGCCTCCCACTGCATCCCAACAAAACATTCATCTTCAACATCAACAGCAACAGCAGCAGCACCACCACCAGAATGGTAATGGCAACTCCAATTCCGACATAAAACAATAG 1695 0.5103 MGENEEATNDMMQRLHCSSSFLKQPLNMEQLSIPQFNPSQMRARHQHQHQFDGGNSNKRAGIPPSHPHQIPPISPYSQIPVTRQQQMGSHNISPTPTHTRSLSQPSFFSLDSLPPLSPSPFRDSSSTSVSEAADVSMEDRDVTSHSLLPPSPFARTLNTSTNSNLPLPPRKAHRRSNSDIPFGFSTVLQSSPPLIPLRGRENPVLAKPAQLVKRETPWDRGVDHSNVEGSGEKKSPEGEVVDDLFSAYMNLDSFDALNSSGTDDKNGTENRDDLDSRASGTKTNGGDSSDNEAESSVNESGDGAVRQGGSEKREGMKRSAGGEIAPTTRHYRSVSMDSFISKLNFGDESPKLPPSPGPRTGLLSPAGGVDGNSSAFSLEFGNGEFSGPELKKIMANEKLAEIALTDPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSAGLTNQNSELKFRLQSMEQQAKLRDALNEALTAEVQRLKLATAELSGDSHGSSCLIPQHSVNPLMFQQQQPPTASQQNIHLQHQQQQQQHHHQNGNGNSNSDIKQ 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02518 564 MobiDBLite consensus disorder prediction 279 303 - -
Viun11g02518 564 FunFam probable transcription factor PosF21 407 460 - -
Viun11g02518 564 MobiDBLite consensus disorder prediction 26 178 - -
Viun11g02518 564 MobiDBLite consensus disorder prediction 149 167 - -
Viun11g02518 564 Coils Coil 424 479 - -
Viun11g02518 564 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 406 469 IPR004827 GO:0003700|GO:0006355
Viun11g02518 564 Gene3D - 407 460 - -
Viun11g02518 564 MobiDBLite consensus disorder prediction 526 564 - -
Viun11g02518 564 MobiDBLite consensus disorder prediction 257 330 - -
Viun11g02518 564 SMART brlzneu 404 468 IPR004827 GO:0003700|GO:0006355
Viun11g02518 564 MobiDBLite consensus disorder prediction 26 44 - -
Viun11g02518 564 MobiDBLite consensus disorder prediction 206 238 - -
Viun11g02518 564 MobiDBLite consensus disorder prediction 75 133 - -
Viun11g02518 564 CDD bZIP_plant_RF2 409 460 IPR044759 GO:0003700|GO:0006355
Viun11g02518 564 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 103 554 - -
Viun11g02518 564 Pfam bZIP transcription factor 408 466 IPR004827 GO:0003700|GO:0006355
Viun11g02518 564 SUPERFAMILY Leucine zipper domain 408 459 IPR046347 GO:0003700|GO:0006355
Viun11g02518 564 MobiDBLite consensus disorder prediction 213 238 - -
Viun11g02518 564 MobiDBLite consensus disorder prediction 345 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02518 Viun-Chr11 38552582 38556571 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02518 1 527 bZIP Transcription Factor Family AT4G38900 59.206 0.0 531
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun11g02518 bZIP_1 2e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02518 - - gmx:780560 860.522
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g02518 11 38552582 38556571 Viun11g02518 11 38552582 38556571 ECH