Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02480 ATGGGTGAGGTAGCGCGTAGAGGATGTTGTCCTCCAATGGATCTGTTCCGTTCGGAGCCGATGCAACTGGTTCAGCTCATCATCCCAATCGAATCCGCTCACCGCACTGTCTCCTACCTCGGCGACCTTGGCCTTCTTCAGTTCAAAGATCTCAATGCAGATAAGAGTCCTTTTCAGCGAACCTATGCAACTCAGATTAAAAGATGTGGAGAGATGGCTCGGAGACTGCGTTTCTTCAAGGAGCAAATGTTGAAGGCAGGTGTTTCACCAAAATATTCCACAACACCATTTGATGTGAACATTGATGACCTTGAGGTAAAACTTACAGATATTGAGTCAGAGTTAATTGAGATGAACGCAAATGGTGAGAAGTTGCAACGGTCATACAATGAACTTCTGGAGTATAAGCTTGTTTTACAGAAGGCTGGTGAGTTTTTCCGCTCAGCTCAAAGCCGTGCATTAGAGCAGCAGAGAGAATATGAATCCCGTCATCTGGGGGATGAATCTATAGAAACACCTTTATTACAGGACCAAGAATTGTTAGGTGATTCGTCAAAGCAAGTTAAGTTGGGGTTTTTAGCAGGTCTTGTTCCCAGGGAAAAGTCCATGGTATTTGAGAGAATTTTATTTCGTGCTACTAGAGGAAATGTATTTTTAAGGCAGGCTACTGTTGAGGATCCTGTCACAGACCCTATTTCTGGAGAAAAGACTGAGAAAAATGTTTTTGTGATCTTCTATGCTGGTGAAAGAGCAAAAGCCAAGATTCTCAAAATATGTGAAGCCTTTGGTGCTAATCGTTACCCTTTTGCTGAGGAACTTGGAAAACAAGCTCAAATGATCACAGAGGTTTCTGGAAGACTTGTGGAATTGAAGACCACTATAGATGCTGGACTACATCACCGGGATAACTTGCTAAATGCTATTGGGGCTCAATTTGAGCAATGGGATGTTCTGGTGAGGAAGGAGAAATCTATTCATCATACCCTGAACATGCTGAGCCTTGATGTGACGAAAAAATGTCTTGTGGCTGAGGGGTGGAGTCCTGTATTTGCAAATAAGCAGATCCAGGATGCATTACAGCGGGCAGCATTGGACTCTAATTCTCAAGTCAATGCCATTTTCCAAGTTCTGCATACCAGGGAGTTGCCGCCTACCTATTTCCGCACAAATAAATTTACTTCTTCTTATCAAGGAATTATCGATTCATATGGGGTTGCTAAGTATCAGGAGGCAAATCCGACTGTGTATACTGTAGTTACCTTTCCATTTCTTTTTGCTGTTATGTTTGGCGATTGGGGGCATGGAATATGTTTACTACTGGCAGCTCTATATTTCATAATCAGGGAGAAGAAACTATCTAGTCAGAAGCTTGATGACATCACGGAGATGACTTTTGGAGGTCGTTATGTTATTTTGCTGATGGCGCTGTTCTCAATCTACACTGGCTTTATCTATAATGAGTTCTTTTCTGTTCCATTTGCACTCTTTGCCCCCTCTGCTTATGATTGTCGTGACCTCTCTTGCAGGGATGCTACAACTGTGGGCTTGATAAAAGTGCGTGACACTTATCCTTTTGGAGTTGATCCTGTATGGCATGGAACACGAAGTGAACTACCATTTCTGAACTCATTGAAAATGAAAATGTCAATTCTTCTTGGAGTTGCTCAAATGAACCTTGGAATTGTTATGAGCTATTGCAATGCCCTATTCTTTAGAAACAAAGTGAATGTGTGGTTCCAGTTCATTCCCCAGATGATATTTCTCAACAGTCTATTTGGCTACCTAGCCCTTCTTATTATTGTGAAGTGGTGTACTGGTTCTCAAGCTGATTTGTACCATATTTTGATCTACATGTTCCTTAGCCCGACTGATGATTTGGGTGAGAACCAACTCTTTGTTGGTCAGAAGAATTTGCAGCTTGTGCTTTTGCTTCTGGCTTTTGTCTCTGTCCCCTGGATGCTGTTGCCAAAACCTTTTATTTTAAAGAAGCAACATGATGCTAGGCACGGGGCTGAATCGTATACACCACTTGAAAGTACAGATGAGAGCTTGCAAGTGGAGTCAAACCACGATTCCCATGGTCATGAGGAATTTGAGTTCAGTGAAGTCTTTGTACATCAACTTATACATACCATAGAATTTGTGCTTGGAGCAGTCTCTAATACAGCTTCTTACCTCCGTCTATGGGCCCTTAGTCTTGCTCATTCAGAGTTATCAAGTGTATTCTACGAGAAGGTTCTGCTGATGGCATGGGGGTACAATAATGTGATTATTCTGATAGTGGGTCTCATTGTTTTCATCTTCGCTACCGTCGGAGTGTTACTTGTCATGGAAACTCTGAGTGCCTTCTTGCATGCGTTGCGACTTCACTGGGTGGAGTTTCAAAACAAGTTTTACGAAGGCGATGGTTACAAGTTCCACCCTTTCTCGTTCTCCTTACTGGATGATGAGGAATGA 2457 0.4245 MGEVARRGCCPPMDLFRSEPMQLVQLIIPIESAHRTVSYLGDLGLLQFKDLNADKSPFQRTYATQIKRCGEMARRLRFFKEQMLKAGVSPKYSTTPFDVNIDDLEVKLTDIESELIEMNANGEKLQRSYNELLEYKLVLQKAGEFFRSAQSRALEQQREYESRHLGDESIETPLLQDQELLGDSSKQVKLGFLAGLVPREKSMVFERILFRATRGNVFLRQATVEDPVTDPISGEKTEKNVFVIFYAGERAKAKILKICEAFGANRYPFAEELGKQAQMITEVSGRLVELKTTIDAGLHHRDNLLNAIGAQFEQWDVLVRKEKSIHHTLNMLSLDVTKKCLVAEGWSPVFANKQIQDALQRAALDSNSQVNAIFQVLHTRELPPTYFRTNKFTSSYQGIIDSYGVAKYQEANPTVYTVVTFPFLFAVMFGDWGHGICLLLAALYFIIREKKLSSQKLDDITEMTFGGRYVILLMALFSIYTGFIYNEFFSVPFALFAPSAYDCRDLSCRDATTVGLIKVRDTYPFGVDPVWHGTRSELPFLNSLKMKMSILLGVAQMNLGIVMSYCNALFFRNKVNVWFQFIPQMIFLNSLFGYLALLIIVKWCTGSQADLYHILIYMFLSPTDDLGENQLFVGQKNLQLVLLLLAFVSVPWMLLPKPFILKKQHDARHGAESYTPLESTDESLQVESNHDSHGHEEFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVLLMAWGYNNVIILIVGLIVFIFATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFHPFSFSLLDDEE 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02480 818 PANTHER VACUOLAR PROTON ATPASES 15 815 IPR002490 GO:0033179|GO:0046961|GO:1902600
Viun11g02480 818 Coils Coil 101 128 - -
Viun11g02480 818 PIRSF ATP6V0A1 11 818 IPR026028 GO:0000220|GO:0046961
Viun11g02480 818 Pfam V-type ATPase 116kDa subunit family 39 811 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02480 Viun-Chr11 38305427 38316107 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02480 13 818 Primary Pumps ATPases(2) AT4G39080 78.342 0.0 1320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02480 K02154 - gmx:100783125 1506.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g02480 11 38305427 38316107 Viun11g02480 11 38305427 38316107 ECH