Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02469 ATGGCTTCCTCAAGTGGAACATGTTCAGGTTCATCCTCTCTGCTTCAGAACTCGGGTTCTGAGGAGGACTTGCAAGCGGTAATGGATCAGAGAAAGAGGAAGAGAATGATTTCGAACCGCGAATCTGCACGGCGATCTCGCATGAGGAAGCAGAAGCACCTGGACGATCTGGTTACCCAGGTGGCTCAGCTGAGAAAGGAGAATCAGCAGATACTGACCACCGTGAACATCACCACGCAGCAGTTCTTGAGCGTTGAGGCTGAGAACTCGGTGCTGAGGGCTCAGGTGGGAGAGCTGAGTCACAGGTTAGAGTCTCTGAACGAGATCATCGATGTTCTGAATGCGGGTTTTGGCAGCACCACCTTCGTTGAACCAAGCACCAATAGCACCACCACCTTCTTCAACCCCATGAACATGGGGTATCTGAACCACCCTATCATGGCTTCTGCAGATATATTGCAGTACTGA 468 0.5128 MASSSGTCSGSSSLLQNSGSEEDLQAVMDQRKRKRMISNRESARRSRMRKQKHLDDLVTQVAQLRKENQQILTTVNITTQQFLSVEAENSVLRAQVGELSHRLESLNEIIDVLNAGFGSTTFVEPSTNSTTTFFNPMNMGYLNHPIMASADILQY 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02469 155 CDD bZIP_plant_GBF1 32 82 IPR045314 GO:0003700|GO:0006355
Viun11g02469 155 MobiDBLite consensus disorder prediction 1 52 - -
Viun11g02469 155 Coils Coil 47 74 - -
Viun11g02469 155 Gene3D - 29 86 - -
Viun11g02469 155 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 34 49 IPR004827 GO:0003700|GO:0006355
Viun11g02469 155 PANTHER BZIP TRANSCRIPTION FACTOR 44 8 153 - -
Viun11g02469 155 MobiDBLite consensus disorder prediction 1 24 - -
Viun11g02469 155 SMART brlzneu 27 91 IPR004827 GO:0003700|GO:0006355
Viun11g02469 155 Pfam bZIP transcription factor 31 75 IPR004827 GO:0003700|GO:0006355
Viun11g02469 155 SUPERFAMILY Leucine zipper domain 31 83 IPR046347 GO:0003700|GO:0006355
Viun11g02469 155 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 29 92 IPR004827 GO:0003700|GO:0006355
Viun11g02469 155 FunFam Basic region/leucine zipper protein 29 111 - -
Viun11g02469 155 MobiDBLite consensus disorder prediction 25 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02469 Viun-Chr11 38223580 38225039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02469 25 155 bZIP Transcription Factor Family AT4G34590 56.028 1.15e-47 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun11g02469 bZIP_1 6.2e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02469 K25786 - gmx:100101862 246.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g02469 11 38223580 38225039 Viun11g02469 11 38223580 38225039 ECH