Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun11g02457 | ATGGCACCAAAGAAGGATAAGGCTCCTCCACCTTCCTCCAAGCCCGCCAAATCTGGCGGTGGCAAGCAGAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAATAACATGGTGCTGTTCGACCAGGGCACCTATGACAAACTCCTCTCAGAAGCACCCAAATACAAGCTCATCACTCCTTCCATTCTCTCTGATCGTTTGAGGATAAATGGATCACTTGCAAGGAAGGCTATCAGAGAACTGATGGCTAGAGGTTCAATCAGGATGGTGTCTGCCCATGCAAGTCAGCAAATTTACACCAGGGCAACAAACACCTAA | 327 | 0.4832 | MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKLITPSILSDRLRINGSLARKAIRELMARGSIRMVSAHASQQIYTRATNT | 108 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun11g02457 | 108 | Pfam | S25 ribosomal protein | 7 | 105 | IPR004977 | - | |
Viun11g02457 | 108 | Gene3D | - | 21 | 108 | - | - | |
Viun11g02457 | 108 | MobiDBLite | consensus disorder prediction | 1 | 36 | - | - | |
Viun11g02457 | 108 | PANTHER | 40S RIBOSOMAL PROTEIN S25 | 1 | 108 | IPR004977 | - | |
Viun11g02457 | 108 | FunFam | 40S ribosomal protein S25 | 21 | 108 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun11g02457 | Viun-Chr11 | 38157234 | 38158866 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun11g02457 | 1 | 107 | Cytoplasmic Ribosomal Protein Gene Family | AT4G34555 | 92.523 | 1.37e-55 | 166 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun11g02457 | K02975 | - | gmx:100499810 | 162.155 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Viun11g02457 | 11 | 38157234 | 38158866 | Viun11g02457 | 11 | 38157234 | 38158866 | ECH |