Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02332 ATGGATGGTTATGGTGGTCAGGGTGATGTTATCCCTGCTATGATTAAGAAGGAAGACATTGCTACGTGGGAAGATAAGCTAAAGGAAGGAGAAAGTTATATAATGCATAACTTCAAAATTCTCAACAACAGAGCTCAATATAGAGTTTGCGACCACCCTTATAAGCTATTGTTTATTGGAGCAACATCTGTACGACGACAACCAATTGCCAGTATTCCTGCAAAAGTTTGGAAGTTCAAGAGTATAAAGGATATCATTGATGGAAACTATTCTGCAGATTTGTTGGTTGATGTCATTGGTGTGGTGGATAATGTGGAGGAGAAACCAAGTTCCAAAAATGTTGTGTTTGACCTAAAGGACTTGAGTGGTGCGTCAATCTGTTGTACTCTTTGGGATTCATATTGTTTGCGTTTGGTTAGTTATTGGAGGGAAAGTCGTGACACACCTTATCCAGCTATTATTCTTACTCAGGCAAAGATAAAGGCTGCCTCAGGTCCATGGCCGGTGTCATTGTCTAATTGTTGGAATGGATCGAAGTTGTTTATGGGAGATGATAGATCAGAACTGATTGAATTTAGGAAGGAATTTTCAAAAACTACTGCTCATGAAATTTTCGAGGAGGGAAGCCAATATAGTGGATCTTCCCAGATTAGTCATGTTGATAGGTTTATGTATAAAACTGTTGTTAAGAGTGTTTCACAGATCCTGACTGTGATAGAGGAGATTTCATGTGTTACTGTTGCACATACACTTAAGTTTAATTTAGGAAATGATGGATGGAGTTACTTGGTTTGTAACTTATGCGCAAAAAGAACATATGAAGTTGGTTCTTTTAAGTGTTTGAATTGTGATGGTTATAATGAGTATCCAAAAATGAGGTACAAGCTTGAAATTCAAGTGACTGATGGAAAAAAGGTTGCTAACTTCATGCTTTGGGACCAAGACTGCATCAATTTAATTGGTCTTTCTGCTGGTGACTTGCGAAAGAAAATGATCAAGGATGGTGAGGAGGATCCTAAGTGTTTTCCACAGGATCTAGACGTTCTTTTGGGTTGTACTTTGGCTTTCAAGGTCAAGCCACAAGGAAATAACCGACCTGCTTCAGTAATGAGAGTTTCAACTGATCGTGAAATCATAGGACACATTAGTAGTCTTCTTGGACAAACTGAGGTAATGGAAATTGTTGAAGCTAAGGAAAACTGTTCTGATCAATCAGAGCTTCGTAAGGGCAAGTCCATAGTAAGTACTTATTAA 1254 0.3836 MDGYGGQGDVIPAMIKKEDIATWEDKLKEGESYIMHNFKILNNRAQYRVCDHPYKLLFIGATSVRRQPIASIPAKVWKFKSIKDIIDGNYSADLLVDVIGVVDNVEEKPSSKNVVFDLKDLSGASICCTLWDSYCLRLVSYWRESRDTPYPAIILTQAKIKAASGPWPVSLSNCWNGSKLFMGDDRSELIEFRKEFSKTTAHEIFEEGSQYSGSSQISHVDRFMYKTVVKSVSQILTVIEEISCVTVAHTLKFNLGNDGWSYLVCNLCAKRTYEVGSFKCLNCDGYNEYPKMRYKLEIQVTDGKKVANFMLWDQDCINLIGLSAGDLRKKMIKDGEEDPKCFPQDLDVLLGCTLAFKVKPQGNNRPASVMRVSTDREIIGHISSLLGQTEVMEIVEAKENCSDQSELRKGKSIVSTY 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02332 417 CDD RPA1_DBD_B_like 97 194 - -
Viun11g02332 417 Gene3D - 208 404 IPR012340 -
Viun11g02332 417 SUPERFAMILY Nucleic acid-binding proteins 78 197 IPR012340 -
Viun11g02332 417 Gene3D - 1 67 IPR012340 -
Viun11g02332 417 SUPERFAMILY Nucleic acid-binding proteins 243 364 IPR012340 -
Viun11g02332 417 Pfam Domain of unknown function DUF223 7 92 IPR003871 -
Viun11g02332 417 CDD RPA1_DBD_A_like 7 64 - -
Viun11g02332 417 Gene3D - 71 207 IPR012340 -
Viun11g02332 417 Pfam Replication factor-A C terminal domain 256 337 IPR013955 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02332 Viun-Chr11 37535563 37537550 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02332 25 359 Core DNA Replication Machinery Family AT4G19130 21.170 6.71e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02332 - - vun:114170410 853.203