Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02294 ATGGAGTTTGAGATTGATGGTACTGGCGAGGCAATAGCAAATGCTGCTATTGATGACAACAGAGAAGGTGAATCTATGGAACCAGATTACAGACAAGACGAAGGTGATAATGTTCCTCAAGATTCCTCTGGGATCACAATCCCATTTGCAATTCCCACAGTATCGGTTGCTGCAGTCGAAGAGCCTTATGTGGGTCAGGAATTTGAGTCAGAATCAGCAGCACACGCATTTTACAATGCATATGCCACAGAGGTTGGATTCATCGTGCGTGTGAGTAAACTCTCACGATCAAGGCGCGATGGAACTGCCATTGGACGTGCTCTTGTCTGCAACAAAGAAGGTTTCAGAATGCCTGACAAGCGTGAGAAGATTGTGAGGCAAAGGGCTGAGACCAGGGTTGGTTGCCGAGCAATGATCATGGTGAGAAAAGTTAGTTCTGGCAAATGGGTCGTTACAAAGCTTGTAAAAGAACACACACATCCTTTGACTCCTGGTAAAGGCAGAAGAGATTTCGTCTATGAACAATATCCGAATGAACACGACAAAATTCGGGAACTATCTCAGCAGTTGGCAACTGAGAAAAAACGATCTGCAACCTATAAAAGGCATCTTGAACTGATATTTGAGCACATTGAAGAGCATAACGAGAGTCTTTCAAAGAAAATACAGCACATAGTAGACAGTGTGAGGGAGATGGAAGCCAAAGAACAACAGAGTCAACTCCAATGA 729 0.4403 MEFEIDGTGEAIANAAIDDNREGESMEPDYRQDEGDNVPQDSSGITIPFAIPTVSVAAVEEPYVGQEFESESAAHAFYNAYATEVGFIVRVSKLSRSRRDGTAIGRALVCNKEGFRMPDKREKIVRQRAETRVGCRAMIMVRKVSSGKWVVTKLVKEHTHPLTPGKGRRDFVYEQYPNEHDKIRELSQQLATEKKRSATYKRHLELIFEHIEEHNESLSKKIQHIVDSVREMEAKEQQSQLQ 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02294 242 Pfam FAR1 DNA-binding domain 77 163 IPR004330 -
Viun11g02294 242 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 21 238 - -
Viun11g02294 242 MobiDBLite consensus disorder prediction 20 36 - -
Viun11g02294 242 Coils Coil 215 235 - -
Viun11g02294 242 MobiDBLite consensus disorder prediction 1 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02294 Viun-Chr11 37365629 37368229 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Viun11g02294 FAR1 9.6e-31 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02294 - - var:108338935 443.351