Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02273 ATGTTTTGGTTTCTTTGTGTTATGGGGATCTCGCTAAAACATCATTTGTTGAACGCGAATCCATGTTCGTTTAGGCTTCTGTTTGAGCTGGTGGTTTTATCGTACTTGTGGTTACAAGTTACAAGCCTTGGTTCCATGTCATCCATTGCAATCTCGTACGGCGAAAAGGGTTCCGTGTTTTGTGGTTTGAAATCTGATGGCTCTCACACAGTGACATGTTATGGAGCCAACTCAGCCATAATCTATGGAACACCAACCCAGTTTTCGTTTCTTGGTCTAACAGCTGGAGATGGGTTTGTCTGTGGGCTTCTAATGGGTTCCAATCAACCGTATTGCTGGGGTAGCAGTGGTTACATTGAAATGGGAGTGCCTCAACCTATCATCGGAGGAGCACAGTACCTAGAAATCAGTGCCGGTGATTACCATGTTTGTGGCTTGAGGAAACCTTTGACTGGGAAACACAGGTACATTTCCTTGGTTGATTGCTGGGGCTACAACATGACCAAAAACTATGTTTTTGGGGGACAGATTGAATCAATCACAGCTGGTTCCGAATTCAATTGTGGTCTTTTTTCTCAGAACAGGACTGTGTTCTGCTGGGGTGATGAGACTAATAGTCTAGTGATTAGTTTGATTCCACAAGAGAAGAGATTCCAGAAAATTTCAGCTGGTGGGTATCATGTGTGTGGAATCTTGGAGGGAGTGAATTCAAGGACATTTTGTTGGGGGAGAAGCTTGAACCTTGGGGAAGAAATTTCAGTGGAACATGCAGGTCAAGGAAACGTTGATTTGGCTCCAAATGATCCCATGATTTCTGTTGTGGGAGGGAAGTTCCATGCATGTGGGATTAAGAGCTATGATCGTGGAGTGATTTGTTGGGGCTTTATCATCAAACGAAGCACTCCATCTCCTAGAGGGATTAAGGTTTTTGAAGTTGCAGCCGGTGATTACTTTACCTGTGCAGTTCTTGCTGACAAATCTCTTATGCCTTCATGCTGGGGTGTTGATTTTCCCACTTCACTTCCTTTAGCCGTTTCACCAGGAATGTGTCAACCTGCTCCATGCCCTCCTGGTTCCTACGCCATTGATCAGCATAAAGGTCTCTGCAAATCACCAGATTCTAGTGTTTGCATGAGGTGCAGTGCTGCTTGTCCTCCTGAAATGTTTCAGAAGAGTGCATGCAATTTGGCTTCTGATAGAGTATGCGAATATAACTGTGCCTCTTGTTCTTCATCCGAATGCTTCATGAACTGCTCCTCTTCATATTCCAATGCTTCCACTGAGAAAAAAACTGAAAAGTTCTGGGCTTTACAGTTACCAGTTGTCATTGCCGAGATTGCTTTTGCGGTTTTCATAGTTAGTGTTGTGTCAATAACTGCAATTTTATACGTCCGCTACAGGCTAAGAGATTGTGAGTGTTCAAAAGGGTCAAAGGGGAAGAAACTCAACGGGAGTTCTTCCCTGCAAAACGAGAATAAGGTGAGGCCAGACATTGAGGAGTTGAAGATCAGAAGGGCTCAAATGTTCAGCTACGAGGAACTAGAAAGTGCAACTTGCGGATTCAAGGAAGAGTCCATAGTGGGGAAGGGGAGTTTCTCGTGTGTGTTCAAGGGAGTGTTGAAAGATAACACAGTTGTTGCTGTCAAAAGAGCAATAGTGTCTCCCAACATGCAGAAGAATTCCAAGGAGTTTCACACCGAACTGGACTTGCTCTCAAGGTTGAACCACGCTCATTTGCTCAACCTTCTAGGCTACTGTGAAGAAGGTGGAGAGAGACTTCTTGTGTATGAGTTCATGGCTCATGGCTCCTTGCACCAACACTTGCATGGCACAAACCAAGTGCTGAGAGAACAGTTAAATTGGATAAGGAGAGTGACCATTGCAGTGCAAGCAGCACGTGGAATTGAATATTTGCATGGCTATGCATGCCCACCAGTGATTCACAGAGACATAAAGTCCTCAAACATTCTCATTGATGAAGAACACAACGCAAGAGTGGCTGATTTTGGTTTATCACTGTTAGGTCCTGCAGATAGTGGTTCACCACTGGCTGAACTCCCAGCTGGGACTCTTGGCTATCTTGATCCTGAATACTACAGGCTTCATTACCTCACAACAAAATCTGATGTGTACAGTTTTGGAGTTCTTCTTTTGGAGATTCTGAGTGGTAGAAAAGCCATAGACATGCAGTATGAAGAAGGGAACATAGTGGAATGGGCAGTGCCTCTTATAAAATCAGGAGATGTAACTGCAGTTTTGGACCCAGTTTTGAAACCCCCTCCTGAGGTAGAAGCATTGAAGAGAATAGCCAATGTGGCAAGTAAGTGTGTGAGGATGAGAGGGAAAGAGAGACCTTCAATGGACAAAGTAACAACAGCTTTGGAGAGAGGTCTTGCACAGTTGATGGGTAGTCCATGCATTGAGCAACCTATTTTGCCTACTGAGGTTGTTTTGGGAAGCAACAGATTGCACAAGAAATCATCTCAGAGATCCTCAAACAGGTCAGTTTCTGAGACTGATGTGGTGGAACATGAGGATCAGAGATTTGAGTTCAGGGCACCCTCATGGATTACTTTCCCCAGTGTGACATCTTCTCAGAGGAGAAAGTCATCAGTGTCTGAGGTGGATGTTGATGGGAAGAACAATGCAGAAGGTAAGAACTTGAGCAGTGTTGGAGGGGGTGGTGATGTTTTGAGAAGCCTTGATGAAGAGATTGGTCCTGCTTCTCCAGGAGAGAGGCTGTTCTTGCAACACAATTTCTAA 2763 0.4455 MFWFLCVMGISLKHHLLNANPCSFRLLFELVVLSYLWLQVTSLGSMSSIAISYGEKGSVFCGLKSDGSHTVTCYGANSAIIYGTPTQFSFLGLTAGDGFVCGLLMGSNQPYCWGSSGYIEMGVPQPIIGGAQYLEISAGDYHVCGLRKPLTGKHRYISLVDCWGYNMTKNYVFGGQIESITAGSEFNCGLFSQNRTVFCWGDETNSLVISLIPQEKRFQKISAGGYHVCGILEGVNSRTFCWGRSLNLGEEISVEHAGQGNVDLAPNDPMISVVGGKFHACGIKSYDRGVICWGFIIKRSTPSPRGIKVFEVAAGDYFTCAVLADKSLMPSCWGVDFPTSLPLAVSPGMCQPAPCPPGSYAIDQHKGLCKSPDSSVCMRCSAACPPEMFQKSACNLASDRVCEYNCASCSSSECFMNCSSSYSNASTEKKTEKFWALQLPVVIAEIAFAVFIVSVVSITAILYVRYRLRDCECSKGSKGKKLNGSSSLQNENKVRPDIEELKIRRAQMFSYEELESATCGFKEESIVGKGSFSCVFKGVLKDNTVVAVKRAIVSPNMQKNSKEFHTELDLLSRLNHAHLLNLLGYCEEGGERLLVYEFMAHGSLHQHLHGTNQVLREQLNWIRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPADSGSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMQYEEGNIVEWAVPLIKSGDVTAVLDPVLKPPPEVEALKRIANVASKCVRMRGKERPSMDKVTTALERGLAQLMGSPCIEQPILPTEVVLGSNRLHKKSSQRSSNRSVSETDVVEHEDQRFEFRAPSWITFPSVTSSQRRKSSVSEVDVDGKNNAEGKNLSSVGGGGDVLRSLDEEIGPASPGERLFLQHNF 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02273 920 FunFam Receptor protein kinase CRINKLY4 599 801 - -
Viun11g02273 920 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 28 920 - -
Viun11g02273 920 FunFam serine/threonine-protein kinase-like protein CCR1 491 598 - -
Viun11g02273 920 SMART serkin_6 521 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g02273 920 Pfam Protein tyrosine and serine/threonine kinase 524 793 IPR001245 GO:0004672|GO:0006468
Viun11g02273 920 ProSitePatterns Protein kinases ATP-binding region signature. 527 549 IPR017441 GO:0005524
Viun11g02273 920 Gene3D Phosphorylase Kinase; domain 1 491 598 - -
Viun11g02273 920 Gene3D Transferase(Phosphotransferase) domain 1 599 802 - -
Viun11g02273 920 FunFam Serine/threonine-protein kinase-like protein CR4 42 209 - -
Viun11g02273 920 Gene3D - 92 347 IPR009091 -
Viun11g02273 920 MobiDBLite consensus disorder prediction 822 844 - -
Viun11g02273 920 SUPERFAMILY Protein kinase-like (PK-like) 501 794 IPR011009 -
Viun11g02273 920 MobiDBLite consensus disorder prediction 867 899 - -
Viun11g02273 920 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 354 402 IPR001368 GO:0005515
Viun11g02273 920 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
Viun11g02273 920 SUPERFAMILY RCC1/BLIP-II 41 295 IPR009091 -
Viun11g02273 920 MobiDBLite consensus disorder prediction 822 836 - -
Viun11g02273 920 ProSiteProfiles Protein kinase domain profile. 521 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02273 Viun-Chr11 37312464 37316245 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02273 26 920 Receptor kinase-like Gene Family AT3G59420 67.960 0.0 1240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Viun11g02273 PK_Tyr_Ser-Thr 9.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02273 - - gmx:100797455 1709.12