Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02235 ATGGATCTAGAGATACCAATAGAGGACCAGTTCTCCAAATTGCACCCTTCCTTGGCAGAAAACACCAGAATTGGAATAGTTGGTGCTGGTCCAAGTGGCTTATCAGCAGCTTATGCACTAGCCAGGCTTGGTTATAAGAACATCACAGTCTTGGAGAAACATCATACGGTTGGTGGCATGTGTGAATCAGTAGAAATTGAAGGAAAAGTTTATGATCTGGGTGGGCAAGTTCTTGCAGCAAACAGTGCTCCAGTCATTTTTCACTTGGCAAGAGAGACAGCCTCTGAACTAGAAGAATTGGATTCCCACAAGCTTGCTGTCATTGATCATTCCACTGGAAAATATCAAGATATTGAAGTTGCTGATGATTATGTATCAGTTATGTCACTTACATTGGAAATCCAAGAAAAGGTGAAGAATTGTAATCGTATTGGGGTCCATGCTGTTAGTGACATTGCTTCAGACTTAACTCCAGAATATCTTAAGCATCATGGACTCAAATCTGTTCCCAAATCTGTAGCTTATGGTTACACTGCTTCAGGATATGGATTTACTCAAGACATGCCTTATGCCTACCTGCATGAATTTACTAGAACGTCCATGGCTGGAAAAATTCGACGATTCAAAAATGGATATACTAGTCTGTGGCAGAAGATTGCTGAATCGCTTCCCTTAAAACTTTGCTGTAACACTGAAGTATTGGCAATCAGGAGGAACTCTGATGGTGTCACTGTTAAGACCAAGAGCTTAAATAAAGTTGAAACTCTGGAATTTGATAAGATAATAATCTCGGGCTCATTTCCATTAAAATATGGAAGGACTTACAGATCATTTCCTTCAACTTGCATAGAGCGTGAAACAGAAGTAATGGATGCAAGTGACCTTGAAAAGGAATTGTTCAGCAAAGTAGAGACAAATGACTACTACACCACTGTTATAAAGATTAACGGGCTAGAACATTTACCTGTTGGATTTTACTATTTTGGTGAATATATGGAAGATCCCAGCACAATAGGACATCCAGTTGCAATGCAAAAATTTTATGCTGGCTCTAACATATTCTTATTCTGGTCCTATGGCAACTCTGTTGATATTAAGGGACAAGCAGTCACGGAGCTTGCGATCAAGACAATAGAAGCCATGGGAGGAGAAGTTGAGAATGTCATTCTTCAACGCCGCTTTATGTACTTTCCTCATGTTGGTAGCCAAGATATGAAAGATGGGTTTTATGAAAAGTTGGAATCAAAGCTTCAAGGATCAAGAAATACTTACTATGTAGGTGGACTCATGGCTTTCGAGCTAACAGAGAGAAATTCATCTTATGCCATGGCTCTGATCTGCAAGAACTTTGCACATAGCAATGATTTGCCAATATTTCCTTACACTAAGAATCTGTTTCCCTTGCAAACTGAGTGCCAGAAAAAGAACCCTAAAGAATTAGGTGAATTGGAAGAAGTGCAATTTCCTAATTTGCCTACTTTGAATAGCTACTTAAAGCACTGGGGAACTCATCCAATCACTCAAAACAGGATTCTGTATTCTTGGATTAATGAAGAAGGGGCTCCAGTAAGCCAAAGGACCTACAGAGAACTGTGTTTTAATTCTTCTTGCATTGCTCATAAGCTTGTAACAAGCCAAAAGCCGGTTATAAAGCCAGGTGACAAGGTTCTTCTGGTTTATGTCCCCGGTTTGGATTTTATTGATGCCTTCTTTGGATGCCTAAGAGCTAAAGTCATACCAGTCCCAATTCTTCCTCCAGATCCCATGCAAAGAAATGGACAATCACTAAAGCAAATTGAAAATATTGCCAAGTCATGTAGCATTGTGGCAATTTTATCAACAGTTGCTTATCACTCAGCAGTCCGTGCAGGTTCGTTGAAAAATTTAATCTCATTCGTTGGAAAAAATGAGAAATCTTTGGCTCGGTGGCCCAATCTTCCATGGTTGCACACTGATACATGGGTCAAGAAGTCCAAAAGTATGGTTTTGGAACATCTTGATGAACAAGGTGAACCTGAGCCAGGTGATATATGTTTCTTGCAATTTACCTCTGGTTCAACTAGTGATGCTAAAGGAGTCATGATCACTCATGGTGGGCTAATTCACAATGTAAAGCTGATGCGAAGGAGATACAAGAGCACCTCAAGGACAATGCTAGTAAGCTGGCTTCCTCAGTATCATGACATGGGACTGATTGGGGGACTTTTTACATCTCTTGTTAGTGGTGGTTCTGCAGTATTGTTTTCGCCAATGACATTTATCAAGAAACCACTCTTATGGCTTGAAGTTATGAGCAAGTACCGAGCAACTCATAGTGCTGGCCCCAACTTTGCCTTTGAGTTAATGATTCGAAGATTGGAGTCTGACAAGGATAAGCTTCATAATTTAGACCTCTCATCCTTGACTTTTCTTATGGTTGCTGCTGAACCAGTGAGACAGAAGACCCTGAAAAGATTTGTTGAGCTAACCAGTCCGTTTGGCTTATCTGAAAAGGTGATGGCGCCTGGATATGGTTTAGCAGAAAATTGTGTGTTTGTCTGTTGTGCATATGGAGAAGGTAAGCCGATCATTTTGGATTGGCAGGGAAGAGTTTGTTGTGGTTATGTTAATCATGAGGATGCAGATATTGACATTAGAATAGTTGATCCAGAAACTCTTGAAGAGCTTCAGGAAGATGGAAAGGAGGGAGAAATCTGGATTAGTAGTCCAAGTGCAGGAATAGGATACTGGGGAAGGGAAGAGTTGAGTCTAAAAACTTTCAGGAATGAACTTCAGAACCTTCCTGGTCGTAGCTACACAAGAACTGGAGACTTGGGACGAATAATTGATCAGAAATTATTCATCACTGGAAGAATCAAAGATCTTATCATTGTTGCTGGAAGAAATATTTACTCAGCGGATGTTGAGAAGACAGTTGAGACTTCGTCTGACATTCTTCGTCCTGGTTGCTGTGCTGTCGTTGGAGTTCCTGAGGAAATTTTATCAGCAAAGGGGATTTCCACCCCAGATGGCTCTGATCAGGTAGGCTTAGTCGTGATTGCAGAAGTAAGGGATGGTAAGCCAGTCACCAAAGATGTGATTGAGAAAATTAAGACTCGTGTGATGGAAGAACATGGAGTTAATGTTGCTTCCGTCAAGTTGATCAAGCCCAGAACCATCAGCAAAACAACTTCAGGAAAAATCAAGAGGTTTGAATGTGTCAAACAGTTCAGTGATGAAACACTGAACTTGATACCAATAGGTCCAACACCTGTTTTGAGAAAGAAGTCGTTGTTAAGTTCGTTTACTACAGGAATGTTGAGAGAAGGAAAAACACCGGGGCCACTTGCACCAAGGAAAAGGATCAGTAAGAATGAAATTGTAGAGTTCTTGAAAGGGCTAATATCTGAGCAGACTGGAATCTCAGTCAACAACATCTCAATCACAGACAACTTGACCTCATATGGAATTGACTCAATTGGAGTGGTTAAAGCAACTCAAAAACTCTCAGATTTCTTAGCAACTCCGATTTCAGCCATAGATGTTTTCACTGCATCCTGCATTCTAGAATTGGCTAACTTCTGTGAAGATCTTCTATCAAAGTCTCAGCCTCAACTTACTAGCAATTCATCCAATGTTCCAGAAGCTCAGAATGGTTCCACTGAATTTAATGTGGAGGTATCCAAGTCTTGGTGGTTTGGTATCCGTGTACTTCAATTCCTATCTCTTATTTATATTTCTATCATTCTGGTTTCTCCTGCATATCTATCCGTCACTACTTATCTCAATTTCACCTTAAGTGCCAGTAAATGGATAAATGGATTTCCATGGCTACATTACTTAATTTCCCTGACTTTTGCACCTGTTGCTTGGATTCTTTGCATGGCTTCTACTTGCATTTGCATATCATTATTTGGAAGCTCTTTCTTGGGGCCAAACTATGACCCTACCTCTGAAATTTCCATATATTCAATGGATTTTGTCAAGTGGTGGACACTGTATAAGGCCCAAGAAATTTCTTCTAGAGTTCTGGCGGTACACCTCAGAGGAACAGTGTTTCTGAAATGCTGGTTTGAGATGCTGGGCGCAAGGATCGGATCATCAGTTTTACTTGACACGGTTGACATCACTGACCCATCTTTGGTGTCAATTGGAGATGAAGTTACCATCGCTGAAGGTGTTTTGGTTCAAAGCCACGAGGTAAAGAATGGAATTTTACGTTTCCATCCTATTAGGATTGGCAAATGTTCTTCTATTGGACCTTATGCTGTTATCCAAAAGGGAAGTGTCATTGAAGAAGGTGCTGAGATACAGGCCTTGCAAAAGGTTGGACCAGACCAACATGTGTTCAAACCTGCAAAGCTTGATAATGGTATTAAGAAAACAGAGCTCTCTGTTAATATCAGAAAAACTCAATATGATATTATCAACCACTTTATGGGAATCTATCTTGTTGGCTTTCTCAGCTCCCTTGCTGCGATCATTTCCTACTTCTTATATACCAGATTCTCCAACCAACCTCTATCACCCCAACACTTTTCCTTTGTTTGCATTGGTGGGGCCTTCCATTGGATCCCGTTTACAATCGTTGCGTATGCTACCATGTTTTCTGAAGTCTCATCAAACCCAATCACTTTTGCCATTTCATTTACCAGCGCCTATTTGCTTCATGGTTTCATACTCATCATTCTCACCACTGCTTTTACTCGTCTCCTCAAAACTAGTCAAAACCAAACACAATTTAAAACCTGGCTTCGATGTCAAGTCACAACTTCCTGCCACCTTAGATGTGCAAAGCTTCTCTCAGGAACAGAAGCCTTCTGCATATATCTACGCCTTTTGGGTGCCAAAATCGGTAAGCATTGTTCCATCAGAGCCATCAACTCAGTTTCATGTCCAGAGTTAATGTCAATTGGTTCAGGTGTACATCTTGGAGATTTTAGCCGGATAATTACAGGGTTTCATTCTTCAAGCGGATTTGTCAGTGGAAAAATTGAGATTCAGGATAATTCGGTTATTGGGAGTCAAAGTGTAGTCCTACCCGGTTCTCTAGTCCAAAAGAATGTCATTCTAGGTGCACTTTCAGTTGCTCAAATGAATTCTACCCTCCAAGAGGGTGGTGTCTACATTGGATCAAAGTCCCAAGCCGTCATAAGGAACTCGGTGAAGAATGCTTGTGATGAATGGATAAAAGATATAGACAACAACATAAGCAAAAAAAAGGTTGTTGATTTGGCTGCAGGTCTCTACAAAAATGACTCACAGAAATTGACCCTGACCAGAACATGGTTTCAGACATTCTCAGCACTCTTCACTCAGCCACTGCTACAAACAGTTTTACCTCATATGGTGTTGGGTTTAGCAGTCTTTGGTCCCTTGAACTGTGTTCTATACCTAAAGAGTGCCAAGAAACTTCAAATATATTGGTTGCTTCCATTGTTTTGGGTTCAGTCAGGGGCCTTAGCATCATTGGCATGTGTGATAGCCAAATGGGTTCTTGTGGGAAGGAAGAAAGCAGGTGAAAGAGTGGGTATATGGAGTGAAAGGATCACATTGGACAGCACATGGCAGGCCATTAGAACCTTAGTTGGAGAGTATTTTATGGACATGACAAGTGGGTCATTTTGGTTTGTGGTGTGGATGAAGATGATGGGTGCAGATGTGGATATGGAAGATGCAGTTTATGTAGATAGCATGGGAGCCTTATTGAACCCAGAAATGGTGAAGATTGAAAGAAGGGGTTGTGTAGGAAGAGAAGCCTTGTTGTTTGGGCATGTGTATGAAGGTGAAGGAGGAATGGTGAAATTTGGAGAGATCAAAATTGGAGAAGATGGGTTTGTAGGGAGTAGAGCTGTGGCCATGCCTGGTGTGCAGTTAGAGAATGGGAGCAATCTTTGTTCTTTGTCACTTGCCATGAAAGAAGAAATCATTAGATCATGCTGA 5922 0.4093 MDLEIPIEDQFSKLHPSLAENTRIGIVGAGPSGLSAAYALARLGYKNITVLEKHHTVGGMCESVEIEGKVYDLGGQVLAANSAPVIFHLARETASELEELDSHKLAVIDHSTGKYQDIEVADDYVSVMSLTLEIQEKVKNCNRIGVHAVSDIASDLTPEYLKHHGLKSVPKSVAYGYTASGYGFTQDMPYAYLHEFTRTSMAGKIRRFKNGYTSLWQKIAESLPLKLCCNTEVLAIRRNSDGVTVKTKSLNKVETLEFDKIIISGSFPLKYGRTYRSFPSTCIERETEVMDASDLEKELFSKVETNDYYTTVIKINGLEHLPVGFYYFGEYMEDPSTIGHPVAMQKFYAGSNIFLFWSYGNSVDIKGQAVTELAIKTIEAMGGEVENVILQRRFMYFPHVGSQDMKDGFYEKLESKLQGSRNTYYVGGLMAFELTERNSSYAMALICKNFAHSNDLPIFPYTKNLFPLQTECQKKNPKELGELEEVQFPNLPTLNSYLKHWGTHPITQNRILYSWINEEGAPVSQRTYRELCFNSSCIAHKLVTSQKPVIKPGDKVLLVYVPGLDFIDAFFGCLRAKVIPVPILPPDPMQRNGQSLKQIENIAKSCSIVAILSTVAYHSAVRAGSLKNLISFVGKNEKSLARWPNLPWLHTDTWVKKSKSMVLEHLDEQGEPEPGDICFLQFTSGSTSDAKGVMITHGGLIHNVKLMRRRYKSTSRTMLVSWLPQYHDMGLIGGLFTSLVSGGSAVLFSPMTFIKKPLLWLEVMSKYRATHSAGPNFAFELMIRRLESDKDKLHNLDLSSLTFLMVAAEPVRQKTLKRFVELTSPFGLSEKVMAPGYGLAENCVFVCCAYGEGKPIILDWQGRVCCGYVNHEDADIDIRIVDPETLEELQEDGKEGEIWISSPSAGIGYWGREELSLKTFRNELQNLPGRSYTRTGDLGRIIDQKLFITGRIKDLIIVAGRNIYSADVEKTVETSSDILRPGCCAVVGVPEEILSAKGISTPDGSDQVGLVVIAEVRDGKPVTKDVIEKIKTRVMEEHGVNVASVKLIKPRTISKTTSGKIKRFECVKQFSDETLNLIPIGPTPVLRKKSLLSSFTTGMLREGKTPGPLAPRKRISKNEIVEFLKGLISEQTGISVNNISITDNLTSYGIDSIGVVKATQKLSDFLATPISAIDVFTASCILELANFCEDLLSKSQPQLTSNSSNVPEAQNGSTEFNVEVSKSWWFGIRVLQFLSLIYISIILVSPAYLSVTTYLNFTLSASKWINGFPWLHYLISLTFAPVAWILCMASTCICISLFGSSFLGPNYDPTSEISIYSMDFVKWWTLYKAQEISSRVLAVHLRGTVFLKCWFEMLGARIGSSVLLDTVDITDPSLVSIGDEVTIAEGVLVQSHEVKNGILRFHPIRIGKCSSIGPYAVIQKGSVIEEGAEIQALQKVGPDQHVFKPAKLDNGIKKTELSVNIRKTQYDIINHFMGIYLVGFLSSLAAIISYFLYTRFSNQPLSPQHFSFVCIGGAFHWIPFTIVAYATMFSEVSSNPITFAISFTSAYLLHGFILIILTTAFTRLLKTSQNQTQFKTWLRCQVTTSCHLRCAKLLSGTEAFCIYLRLLGAKIGKHCSIRAINSVSCPELMSIGSGVHLGDFSRIITGFHSSSGFVSGKIEIQDNSVIGSQSVVLPGSLVQKNVILGALSVAQMNSTLQEGGVYIGSKSQAVIRNSVKNACDEWIKDIDNNISKKKVVDLAAGLYKNDSQKLTLTRTWFQTFSALFTQPLLQTVLPHMVLGLAVFGPLNCVLYLKSAKKLQIYWLLPLFWVQSGALASLACVIAKWVLVGRKKAGERVGIWSERITLDSTWQAIRTLVGEYFMDMTSGSFWFVVWMKMMGADVDMEDAVYVDSMGALLNPEMVKIERRGCVGREALLFGHVYEGEGGMVKFGEIKIGEDGFVGSRAVAMPGVQLENGSNLCSLSLAMKEEIIRSC 1973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02235 1973 Gene3D - 1109 1191 IPR036736 -
Viun11g02235 1973 SUPERFAMILY Trimeric LpxA-like enzymes 1855 1966 IPR011004 -
Viun11g02235 1973 Pfam AMP-binding enzyme 524 958 IPR000873 -
Viun11g02235 1973 Gene3D - 479 952 IPR042099 -
Viun11g02235 1973 ProSitePatterns Putative AMP-binding domain signature. 680 691 IPR020845 -
Viun11g02235 1973 Gene3D Hexapeptide repeat proteins 1579 1737 - -
Viun11g02235 1973 ProSiteProfiles Carrier protein (CP) domain profile. 1118 1192 IPR009081 -
Viun11g02235 1973 SUPERFAMILY Trimeric LpxA-like enzymes 1605 1705 IPR011004 -
Viun11g02235 1973 Gene3D - 94 202 - -
Viun11g02235 1973 Pfam Phosphopantetheine attachment site 1123 1187 IPR009081 -
Viun11g02235 1973 SUPERFAMILY ACP-like 1116 1199 IPR036736 -
Viun11g02235 1973 CDD FAAL 499 1072 IPR040097 GO:0008610
Viun11g02235 1973 Gene3D - 303 396 - -
Viun11g02235 1973 SUPERFAMILY Trimeric LpxA-like enzymes 1342 1442 IPR011004 -
Viun11g02235 1973 Gene3D - 953 1079 IPR045851 -
Viun11g02235 1973 PRINTS Adrenodoxin reductase family signature 47 60 - -
Viun11g02235 1973 PRINTS Adrenodoxin reductase family signature 23 45 - -
Viun11g02235 1973 SUPERFAMILY FAD/NAD(P)-binding domain 21 271 IPR036188 -
Viun11g02235 1973 PANTHER DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED 131 1741 - -
Viun11g02235 1973 SUPERFAMILY Acetyl-CoA synthetase-like 493 1076 - -
Viun11g02235 1973 ProSitePatterns Phosphopantetheine attachment site. 1147 1162 IPR006162 -
Viun11g02235 1973 Gene3D - 23 446 IPR036188 -
Viun11g02235 1973 Gene3D Hexapeptide repeat proteins 1329 1455 - -
Viun11g02235 1973 Pfam Flavin containing amine oxidoreductase 32 266 IPR002937 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02235 Viun-Chr11 37077343 37084125 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02235 645 991 Monolignol Biosynthesis Gene Families AT1G20480 24.451 2.42e-17 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02235 - - adu:107477067 2898.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03646 5 45685571 45687990 Viun11g02235 11 37077343 37084125 PCT