Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02217 ATGGATTCAGCGACAACAGCTCCTCCCACGTTGCAGGAGCTGGAGCTCGACAACCTCAAAGCTCTCAAAGTCCTAGGAAAAGGTGCCATGGGAACCGTCTTCCTCGTCCACGACACCACCACCAACAACGCCCCCCTCGCCTTGAAAGTCGTCGACAAAACCTGCGTCCGCGCAAAACTCGACGCCGAACGCCGCGCGCGTTGGGAAATCCAAGTCCTCTCAACCCTCTCCCACCCCTTCCTCCCTACCCTCCTCGGAACATTCGATTCCCCACAGTTCTTAGCGTGGGCCATACCCTACTGCCCCGGCGGCGACCTCAACGTCCTCCGCTACCGCCAAACCGACCGCACTTTCTCCCCCACCGTCATCCGCTTCTACGTGGCGGAAATCATCTGCGCGCTCCACCACCTCCATTCCATGGGCATAGCATACCGTGACCTCAAACCAGAAAATGTCCTCATCCAAAACAACGGTCACGTCACCCTCACCGATTTCGACCTCTCCCGCAAACTCACCCTCAAACCTAAACCCCATCTTCCTTCAATCCCCGTCCCCAATCCCAAAGTCAAAGAACCCCGCCGCAAACACCGTCGCAACTTCTCCCGCTGGATCCCCCTCCCTCCCCTCGACGGGAACCGAAGGAAGGCCACCACCAACGCCCTCAAGAAGGCCAAGTCCGCGCGAGTCAGCCCCGTGAGTAGACGAAAACTGAGTTTCTCCAACGGCGAGCGCTCCAACTCGTTCGTCGGAACCGAGGAGTACGTCTCACCGGAGGTCGTTCGAGGCGACGGCCACGAGTTCGCCGTTGATTGGTGGTCCCTCGGAATACTCATCTACGAAATGCTCTACGGTACGACTCCGTTCAAAGGCAAGAATCGCAAGGACACGTTCCGCAACGTCCTCACCAAGGCGCCGGAGTTCGTCGGGAAGAGAACCGCGCTCACGGACCTCATCGAGAAGCTCCTGACGAAGGATCCGACGAGGCGGTTGGGATACACGCACGGCGCTGCGGAGATCAAGGAGCATGAGTTCTTCCGAGGGGTGAAATGGGACCATTTAATTGAGGTTGTGCGGCCGCCGTTCATTCCGTCGCGGGACGACGGCTCCGCGGAGTCGTTGGAGAAGCTTTCCGCCGGGAATTCTGGCGTGGATATTAGGGATTACTTTCAGAATCTTAGATCGGTGCCATCTTCACCGTCAGCGTCAGCCTCCCCATCATCGCCGCGGTGGCGGTTTAAGAAAAATGTTTCTCTAACGGAATTCTAA 1266 0.5798 MDSATTAPPTLQELELDNLKALKVLGKGAMGTVFLVHDTTTNNAPLALKVVDKTCVRAKLDAERRARWEIQVLSTLSHPFLPTLLGTFDSPQFLAWAIPYCPGGDLNVLRYRQTDRTFSPTVIRFYVAEIICALHHLHSMGIAYRDLKPENVLIQNNGHVTLTDFDLSRKLTLKPKPHLPSIPVPNPKVKEPRRKHRRNFSRWIPLPPLDGNRRKATTNALKKAKSARVSPVSRRKLSFSNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWSLGILIYEMLYGTTPFKGKNRKDTFRNVLTKAPEFVGKRTALTDLIEKLLTKDPTRRLGYTHGAAEIKEHEFFRGVKWDHLIEVVRPPFIPSRDDGSAESLEKLSAGNSGVDIRDYFQNLRSVPSSPSASASPSSPRWRFKKNVSLTEF 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02217 421 PANTHER FLIPPASE KINASE 1-RELATED 12 366 - -
Viun11g02217 421 MobiDBLite consensus disorder prediction 176 196 - -
Viun11g02217 421 ProSitePatterns Protein kinases ATP-binding region signature. 25 49 IPR017441 GO:0005524
Viun11g02217 421 SUPERFAMILY Protein kinase-like (PK-like) 16 408 IPR011009 -
Viun11g02217 421 FunFam Serine/threonine-protein kinase UCNL 19 104 - -
Viun11g02217 421 FunFam Serine/threonine-protein kinase OXI1 105 173 - -
Viun11g02217 421 FunFam Serine/threonine-protein kinase OXI1 243 364 - -
Viun11g02217 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Viun11g02217 421 ProSiteProfiles Protein kinase domain profile. 19 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g02217 421 Pfam Protein kinase domain 21 175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g02217 421 Pfam Protein kinase domain 240 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g02217 421 Gene3D Transferase(Phosphotransferase) domain 1 242 364 - -
Viun11g02217 421 Gene3D Transferase(Phosphotransferase) domain 1 105 172 - -
Viun11g02217 421 SMART serkin_6 19 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g02217 421 Gene3D Phosphorylase Kinase; domain 1 19 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02217 Viun-Chr11 36965188 36966817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02217 14 421 AGC Kinase Gene Family AT3G20830 59.712 3.16e-163 463
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Viun11g02217 Pkinase 7.3e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02217 - - gmx:100785281 662.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03622 5 45582672 45585186 Viun11g02217 11 36965188 36966817 PCT