Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02195 ATGGAGATCATGTCAAGCTTAGAGAGAGAGCTGAATGACATGAGGGAGTATTATGAGAGTGGAAAGACTAAGCAAGAATCTTGGAGGGAATCTCAGCTCAAAGGCTTGCGTTCCTTCCTCATGGAAAAACAAGAACATATCATGGAGGCCCTTATGCACGATCTTGGGAAACATCAACTTGAAGCTTTCAGAGACGAGATAGGGACTTTGATCAAGACCTTAAATCTGGCACTGAAGTCTTTGAAAGCTTGGATGTCAGGCAGAAAGGCAGAATTGCCACAAGTAGCATTGCTCACCAGTGCAGAAATTGTTTCAGAACCACTGGGTCTTGTCCTCATTATTTCGTCTTGGAATTTCCCATTTGGACTATCCTTGGAGCCACTTATTGGAGCAATAGCTGCGGGAAACGTGGCAATCTTAAAGCCTTCAGAGTTGTCTCCAGCTTCTTCTTCTCTGCTTGCTTCCAGTCTCATCCCTTATTTGGACAATAAAGCCATTAAGGTGATCCAAGGAGGGTCCCAAGAGACCCAACAACTACTGGAGCAAAGATGGGACAAAATCTTCTTCACAGGAAGTGCACGTGTGGGGCGGATTGTTATGTCTGCTGCTGCGAAGAATTTGACTCCAGTGACTTTGGAGTTGGGTGGAAAATGCCCTGCAGTTGTTGACTCCCTTTCATCTTCCTGGGATATAGAGACCACTGTGAAGAGAATTATTGTGGGAAAATTTGGGGCTTGTGCTGGTCAAGCATGCATAGCCATTGATTATGTTCTTGTAGAAAAGATGTATTGCTCAAAACTGGTGGAACTGATGAAGTTCTGGATCAAGAAAATGTTTGGAGAGAACCCTCAGCATTCCAAAACTATCACCAGGATAGTTAACAAACACCACTTCTCTAGATTGAACAATCTTCTTGCTGATAAAATGGTCAAAGAATCAGTGGTTTATGGTGGCTCAATGGACCAAGAAAACTTATTTATTGAGCCAACCATCTTGGTGGATCCCCCACTGGACGCAGCAATTATGTCAGAAGAGATTTTTGGTCCATTGCTTCCAATAATTACTGTAGAGAAGATTGAGGACAGTATTAGATTCATAAGGAGTAGGCCTAAGCCTCTTGCCATTTATGTCTTCACCAAAAACAAAACCCTAGAGAGAAGAATGATATCTGAAACATCATCTGGCAGTATAACTTTCAATGATGCAATACTACAATATGCAGCTGATTCTCTCCCATTTGGAGGAGTGGGAGAAAGTGGATTTGGCATGTACCATGGGAAGTTCTCCTTTGACACATTTAGCCACCAGAAGGCAATAGTAAGAAGAAGTTTCCTCACAGATTTCTGGTTTAGATATCCTCCATGGACACTAAATAAGTTGCAACTACTTGAAACCTGTTACAATTATGATTATCTGGGGATGCTCCTTGTCATGCTGGGCTTAAAGAGATCATCAAAACGCTTATTTGCAAATCATGTGTAG 1482 0.4224 MEIMSSLERELNDMREYYESGKTKQESWRESQLKGLRSFLMEKQEHIMEALMHDLGKHQLEAFRDEIGTLIKTLNLALKSLKAWMSGRKAELPQVALLTSAEIVSEPLGLVLIISSWNFPFGLSLEPLIGAIAAGNVAILKPSELSPASSSLLASSLIPYLDNKAIKVIQGGSQETQQLLEQRWDKIFFTGSARVGRIVMSAAAKNLTPVTLELGGKCPAVVDSLSSSWDIETTVKRIIVGKFGACAGQACIAIDYVLVEKMYCSKLVELMKFWIKKMFGENPQHSKTITRIVNKHHFSRLNNLLADKMVKESVVYGGSMDQENLFIEPTILVDPPLDAAIMSEEIFGPLLPIITVEKIEDSIRFIRSRPKPLAIYVFTKNKTLERRMISETSSGSITFNDAILQYAADSLPFGGVGESGFGMYHGKFSFDTFSHQKAIVRRSFLTDFWFRYPPWTLNKLQLLETCYNYDYLGMLLVMLGLKRSSKRLFANHV 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02195 493 FunFam Aldehyde dehydrogenase 216 419 - -
Viun11g02195 493 SUPERFAMILY ALDH-like 13 456 IPR016161 GO:0016491
Viun11g02195 493 FunFam Aldehyde dehydrogenase 15 219 - -
Viun11g02195 493 PIRSF ALDH 1 476 IPR012394 GO:0006081
Viun11g02195 493 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 15 437 IPR016162 GO:0016491
Viun11g02195 493 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 216 419 IPR016163 GO:0016620
Viun11g02195 493 Pfam Aldehyde dehydrogenase family 25 439 IPR015590 GO:0016491
Viun11g02195 493 PANTHER ALDEHYDE DEHYDROGENASE 4 481 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02195 Viun-Chr11 36822229 36825547 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02195 1 483 Aldehyde Dehydrogenase Gene Family AT4G36250 53.512 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02195 K00128 - gmx:100817701 838.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03602 5 45465870 45475146 Viun11g02195 11 36822229 36825547 PCT