Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02184 ATGGGAGCTCGTTGCTCTAAATTCTCTCTCTGCTGGTGGCCTTCCCATGTCAAATCAAACCTCCATGATTTATCTGATAATGATGATGATGAGAAGAAGAATGAGAAGGATCCTTGGGGAGGGTTCAGTGAGTACAGTTTGGATCAGCTCAGAGTTGCCACCTCAGGATTCTCACCAGACAACATTGTCTCGGAACACGGTGAGAAAGCTCCAAATGTTGTCTACAAAGGGAGGCTTGAGGACGATAGGACGGTGGCTGTGAAGCGCTTCAATAAGTCTGCTTGGCCTGATTCTCGACAATTCCTAGAGGAGGCACGTGCTGTGGGGCAGCTCAGGAATGAAAGATTGGCTAACTTGGTTGGGTGTTGCTGCGAGGGAGAAGAGAGATTGCTTGTTGCAGAGTTCATGCCCAATGAAACTCTCTCTAAACACCTTTTTCATTGGGAAGCCCAGCCTATGAAATGGGCAATGAGGCTGAGGGTGGCCTTGTATTTAGCTCAAGCTTTGGAATACTGCAGCAGTAAAGGAAGAGCATTGTACCATGATCTTAATGCTTATAGAATTTTGTTTGATCAGGAAGGCAACCCTAGACTCTCTTGTTTTGGACTCATGAAAAACAGTAGGGATGGCAGAAGCTATAGTACAAATTTAGCCTTCACACCTCCAGAGTACTTGAGAACAGGAAGGATCACTGCTGAAAGTGTAGTTTACAGTTTTGGTACCCTATTGCTTGATCTTCTCAGTGGAAAGCATATCCCACCGAGTCATGCACTTGATCTTATACGAGGCAAAAATTTTCTGTTGCTGATGGACTCATGTTTGGAAGGTCATTTTTCAAATGATGATGGGACTGAGTTAGTGAGATTAGCTTCGCGTTGTTTGCAATATGAACCTCGTGAGAGACCAAATGTTAAATCGCTTGTGACTGCTCTCACCCCTCTTCAGAAAGAAACTTCGGTACCGTCATATGTTTTGATGGGCATACCAGATCGGAGCCTGTCATCAAAGGAAACAGTTTCATTAACACCTTTTGGTGACGCTTGTTCCAGAAGAGATCTGACTGCAGTACATGAGATTTTGGATAAAGTGGGCTACAAGGATGATGAAGATGTTGCTAATGAGCTTTCCTTTCAAATGTGGACAAATCAAATACAAGATACTCTAAATTCTAAGAAGCAAGGCGATTCTGCTTTCCATGCTAGAGACTTCTCTACAGCCATTGACTGCTATACACAATTCATCGATGGTGGAACCATGGTATCACCTACCGTGTATGCCAGACGCTGCTTATGCTATCTGATGAATGACATGGCTCAAGAGGCACTTGGAGATGCCATGCATGCTCAATCAATATCTCCAACCTGGCCCACTGCATACTATCTTCAAGCAGCTGCTCTCTTCAGCCTTGGCATGGACAATGATGCACAGGAAAGTCTTAAAGATGGAACAACACTGGAAACCAGGAAGTATAGAAACTGA 1479 0.4429 MGARCSKFSLCWWPSHVKSNLHDLSDNDDDEKKNEKDPWGGFSEYSLDQLRVATSGFSPDNIVSEHGEKAPNVVYKGRLEDDRTVAVKRFNKSAWPDSRQFLEEARAVGQLRNERLANLVGCCCEGEERLLVAEFMPNETLSKHLFHWEAQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDQEGNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRITAESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLLLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNVKSLVTALTPLQKETSVPSYVLMGIPDRSLSSKETVSLTPFGDACSRRDLTAVHEILDKVGYKDDEDVANELSFQMWTNQIQDTLNSKKQGDSAFHARDFSTAIDCYTQFIDGGTMVSPTVYARRCLCYLMNDMAQEALGDAMHAQSISPTWPTAYYLQAAALFSLGMDNDAQESLKDGTTLETRKYRN 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02184 492 FunFam probable serine/threonine-protein kinase At5g41260 137 328 - -
Viun11g02184 492 ProSiteProfiles Protein kinase domain profile. 60 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g02184 492 Gene3D Phosphorylase Kinase; domain 1 30 135 - -
Viun11g02184 492 Gene3D Tetratricopeptide repeat domain 386 491 IPR011990 GO:0005515
Viun11g02184 492 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 11 491 IPR045845 GO:0004672|GO:0009742
Viun11g02184 492 Gene3D Transferase(Phosphotransferase) domain 1 137 328 - -
Viun11g02184 492 SUPERFAMILY TPR-like 390 488 IPR011990 GO:0005515
Viun11g02184 492 FunFam probable serine/threonine-protein kinase At4g35230 31 135 - -
Viun11g02184 492 FunFam probable serine/threonine-protein kinase At4g35230 385 492 - -
Viun11g02184 492 Pfam Protein tyrosine and serine/threonine kinase 73 311 IPR001245 GO:0004672|GO:0006468
Viun11g02184 492 SUPERFAMILY Protein kinase-like (PK-like) 39 318 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02184 Viun-Chr11 36759077 36762908 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02184 45 323 Glycoside Hydrolase AT3G07070 34.405 6.47e-41 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Viun11g02184 PK_Tyr_Ser-Thr 1e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02184 - - gmx:732542 935.636