Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02181 ATGGATGAACACATGCACGGGATGGGAGGGATGGCCCCGTCGCCGCCAACCGCCAACGACACCATGGGCACCATGATGCACCACAAGATGATGATGCACATGACCTTCTTCTGGGGCAAAGACACCGATATTCTCTTCCAAAACTGGCCCGGAGGCAAATCGAATATGTATGTATTGGCCCTCGTTTTCGTTTTCGTCATTTCGGTTTTCGTGCAGTTGCTCTCGCACACCCGTTTCATCAAACCCGGTTCAAACCATGTCGCCGCCGGTCTGTTCAAGACCCTCTTGTTCGCTTTCAGGGTTGGTCTCGCTTATCTGGTTATGCTTTCAATCATGTCTTTTAACGGTGGCGTTTTCTTGGTTGCTGTGTTAGGTCAGACCTTGGGGTTTCTCATTACCACATTCGCTTTCAACAACAAATCGCCCCATGACGAGGGTTTTGATCTTCCTCCAATTTCTTGTTGA 465 0.4968 MDEHMHGMGGMAPSPPTANDTMGTMMHHKMMMHMTFFWGKDTDILFQNWPGGKSNMYVLALVFVFVISVFVQLLSHTRFIKPGSNHVAAGLFKTLLFAFRVGLAYLVMLSIMSFNGGVFLVAVLGQTLGFLITTFAFNNKSPHDEGFDLPPISC 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02181 154 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 23 140 IPR007274 GO:0005375|GO:0016020|GO:0035434
Viun11g02181 154 Pfam Ctr copper transporter family 86 132 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02181 Viun-Chr11 36733459 36734208 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02181 35 154 Inorganic Solute Cotransporters AT5G59030 46.774 1.37e-34 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02181 K14686 - gmx:100306175 242.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g02181 11 36733459 36734208 Viun11g02181 11 36733459 36734208 ECH