Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02171 ATGGATAACGGGGAAGCCCCCATCTTGGTGGAAGAGAGGATAATGCAGGAAATTGAGATACCAATTACATCTGAAAGACTTGATGTTCTTCCTATGAAGACAGAGACATCCTGCTGTTCTGGCTGTCCTTTTTCTGGACATGAAAATAGTGTTGTGACATCAAAAGAGTCTTCAAAGTCGGCAAAGAAACTTTGTGGTCTTATTGTTTTCTATGCTATTGTCATGGTTGTGGAACTTGTTGGTGGAATAAAAGCTCACAGCCTAGCTGTCATCGGTGATGCAGCACATTTGCTTTCTGATATTACTGGATTCTCTATCTCTCTCTTTGCAGTGTGGGCTTCTGGTTGGGAGGCAACACCACATCAATCTTTCGGATACAATCGTCTCGAGGTTTTGGGGGCTCTTATATCTGTTCAGTTAATTTGGTTGATATCTGGTTATTTGATATATGAAGCAGTTGGTAGAATTCTTCTACAACAGGCCAGTGTGAATGGAAAGGTCATGCTTGCAATTGCAACATTTGGGTTTGTTCTTAACTTTATCATGGTTGCATGGATTGGTCATGATCACAGTCATCATCATCATCATGGTTGTGAAGACTCTAGTCATGATCATAGTCATCATCATCATCATCATGAAGACTCTGGTCATGATCATAGTCATCATCATCATCATGAAGACTCGGGTCATTATCATAGTCATCATCATCATGATCATGGGAATAAGGAGCTATCTATAATAAGTGATGAAGAGAGTGCTACCCTGGTTTCAAGTAGTCACACAAAAACAAATGTCTTGAACCTAAATCTTCAGGGAGCGTATTTGCATGTCATGGCTGATATGATTCAATCTGTTGGAGTGATGATTGCTGGAGCCATAATATGGGCTAAACCTAAGTGGTTTATAGTTGATCTTGTGTGCACTCTTATATTCTCTGTTTTATCTTTAAGTGCTACCCTTCCCATGCTTAGGAATCTTTATGGCATTCTCATGGAAAGTACACCAAGGGAGATAGATATTAGCAAGCTAGAAAGTGGCATTAGAAATATCAAGGGAGTGCAGGATGTTCATGACTTGCACATTTGGGCTATAACTCTTGGAAAACTTGTTCTTTCTTGCCATGTAGTTGCTGAGCCTGGCATTAGTTCCATTGATTTACTAGGCATGATTAAACACTACTGTGAAAAAACATATCAAATACAGCATGTAACCATACAAATTGAGTAA 1227 0.3945 MDNGEAPILVEERIMQEIEIPITSERLDVLPMKTETSCCSGCPFSGHENSVVTSKESSKSAKKLCGLIVFYAIVMVVELVGGIKAHSLAVIGDAAHLLSDITGFSISLFAVWASGWEATPHQSFGYNRLEVLGALISVQLIWLISGYLIYEAVGRILLQQASVNGKVMLAIATFGFVLNFIMVAWIGHDHSHHHHHGCEDSSHDHSHHHHHHEDSGHDHSHHHHHEDSGHYHSHHHHDHGNKELSIISDEESATLVSSSHTKTNVLNLNLQGAYLHVMADMIQSVGVMIAGAIIWAKPKWFIVDLVCTLIFSVLSLSATLPMLRNLYGILMESTPREIDISKLESGIRNIKGVQDVHDLHIWAITLGKLVLSCHVVAEPGISSIDLLGMIKHYCEKTYQIQHVTIQIE 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02171 408 NCBIfam cation diffusion facilitator family transporter 62 408 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Viun11g02171 408 MobiDBLite consensus disorder prediction 194 241 - -
Viun11g02171 408 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 336 408 IPR036837 -
Viun11g02171 408 Pfam Cation efflux family 68 331 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Viun11g02171 408 SUPERFAMILY Cation efflux protein transmembrane domain-like 61 332 IPR027469 -
Viun11g02171 408 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 36 408 - -
Viun11g02171 408 Gene3D Cation efflux protein transmembrane domain 60 330 IPR027469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02171 Viun-Chr11 36694262 36696364 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02171 16 408 Inorganic Solute Cotransporters AT2G29410 45.707 1.81e-117 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02171 K14689 - gmx:100777590 592.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g02171 11 36694262 36696364 Viun11g02171 11 36694262 36696364 ECH