Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02162 ATGGAATCTGATCATCATCATCATCACCAACATCACCAACAACCAGCAATATCTGAAAATCCCTCTGATGGGGAGGACCAAGGTGCAACTCACGTGACATCCAGATCCTACGAGTGCAACTTCTGCAGGAGGGGCTTCTCCAATGCACAAGCACTTGGGGGGCACATGAACATACATAGGAAAGACAAAGCCAAGCTCAAGCAACAACAATCTTCAAATCAACCATCTTTCGACAAGGTTGTCCCCCCACAGGATCAGACCAAGTCTGGTGAAGAACGCAACACGCCAAAATGGAATTGGAATGTGTCTCAAGAAGAACATGAACATGAACATGCCTCCTCGAGAGGTTCTCACACAAGGCACCAGCTTCCGCTCTTCGAAGAATCACCAACCAGCAGTGAAACAGTACTGAAGCCGCAAGCTCAAAATACCACTGAAGGAGCCTTGTTATCTACCCGAGATTCATCGTTGAAGTTGGACCTTGAACTCAGACTGGGACTTGAACCGCAGGATTCGTCACCAGAAACGGGTACAAGAAATTTTTTTTGA 549 0.4699 MESDHHHHHQHHQQPAISENPSDGEDQGATHVTSRSYECNFCRRGFSNAQALGGHMNIHRKDKAKLKQQQSSNQPSFDKVVPPQDQTKSGEERNTPKWNWNVSQEEHEHEHASSRGSHTRHQLPLFEESPTSSETVLKPQAQNTTEGALLSTRDSSLKLDLELRLGLEPQDSSPETGTRNFF 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02162 182 ProSitePatterns Zinc finger C2H2 type domain signature. 39 59 IPR013087 -
Viun11g02162 182 ProSiteProfiles Zinc finger C2H2 type domain profile. 37 64 IPR013087 -
Viun11g02162 182 Gene3D Classic Zinc Finger 25 114 - -
Viun11g02162 182 PANTHER OS07G0101800 PROTEIN 14 169 - -
Viun11g02162 182 SUPERFAMILY beta-beta-alpha zinc fingers 34 64 IPR036236 -
Viun11g02162 182 MobiDBLite consensus disorder prediction 68 101 - -
Viun11g02162 182 MobiDBLite consensus disorder prediction 1 32 - -
Viun11g02162 182 MobiDBLite consensus disorder prediction 15 32 - -
Viun11g02162 182 MobiDBLite consensus disorder prediction 102 117 - -
Viun11g02162 182 MobiDBLite consensus disorder prediction 61 154 - -
Viun11g02162 182 MobiDBLite consensus disorder prediction 118 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02162 Viun-Chr11 36662732 36663469 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02162 34 178 C2H2 Transcription Factor Family AT3G53820 35.172 1.16e-18 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02162 - - vun:114170729 359.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g02162 11 36662732 36663469 Viun11g02162 11 36662732 36663469 ECH