Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02156 ATGGGGGAAGAGGTGAAGACGAGCGAGTACGATGAAGAACGGGTCATGGAGTGGGAAGCGGGTCTACCCACCGCTAACGATCTCACGCCTCTCTCTCAGCCGCTGATTCCGCCGGAGCTCGCCACAGCCTTCAGCATATCGCCGGAGCCCCACCGAACCGCTCTTGACGTCAACCGGGCCTCACGCAATACGCTCTCCACGCTGCGCGGCGGTGGGAGCGTGCACCAGGCCTTCTCCTCCTCCAACAACCACCACCACCACGAGGAGGAGGAGGAGGAGGAGGAGGACGAGGACACCGATCGCGACGGCTCGGGGTCGGACTCTCGGAAGCATCGGAAGATCGAGTGCGTGGCGGAGGAGGCGGACTCGGCGGTGCGGACGGAGAACTCGGCGGAGCGGACGGCAGTGAAGCGGCCGCGGCTGGTGTGGACCCCTCAGCTGCACAAGCGGTTCGTGGACGTGGTGGCTCACCTTGGGATCAAGAACGCGGTGCCGAAGACGATTATGCAGTTGATGAACGTGGAAGGGTTGACCCGCGAGAATGTGGCGAGTCATCTTCAGAAGTATCGGCTTTACCTGAAGCGGATGCAGGGTCTCTCCAACGAAGGTCCTTCTTCATCGGATCAGTTATTCGCTTCCACGCCTGTGCCTCAGAGTTTGCACGACTCTGCTCCTCCCAGTGCCCATTCCCATGGTCACTCCCATGGCCATGCCAATGCTCATCTCCCTGTTCCCATGATGTCCATGCCCTATCCCCCTCCCATGATGTCCATGCCTGTCCTCGGCATGCCCCATGCCCATGGCCACATGGGAATCCCTATGCCTACTTCTTCCGCCACCTCAGCTTACCATCCTTACAACATGCTGCACCAAAGGGATTGGGCTCACCTTGCTCCCAATGATAAATGA 909 0.6029 MGEEVKTSEYDEERVMEWEAGLPTANDLTPLSQPLIPPELATAFSISPEPHRTALDVNRASRNTLSTLRGGGSVHQAFSSSNNHHHHEEEEEEEEDEDTDRDGSGSDSRKHRKIECVAEEADSAVRTENSAERTAVKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNEGPSSSDQLFASTPVPQSLHDSAPPSAHSHGHSHGHANAHLPVPMMSMPYPPPMMSMPVLGMPHAHGHMGIPMPTSSATSAYHPYNMLHQRDWAHLAPNDK 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02156 302 MobiDBLite consensus disorder prediction 65 113 - -
Viun11g02156 302 Gene3D - 134 197 - -
Viun11g02156 302 MobiDBLite consensus disorder prediction 199 241 - -
Viun11g02156 302 NCBIfam myb-like DNA-binding domain, SHAQKYF class 139 191 IPR006447 GO:0003677
Viun11g02156 302 MobiDBLite consensus disorder prediction 65 80 - -
Viun11g02156 302 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 135 194 IPR017930 -
Viun11g02156 302 SUPERFAMILY Homeodomain-like 136 195 IPR009057 -
Viun11g02156 302 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 13 272 IPR044841 GO:0003700|GO:0006355
Viun11g02156 302 MobiDBLite consensus disorder prediction 1 18 - -
Viun11g02156 302 FunFam Two-component response regulator 134 197 - -
Viun11g02156 302 MobiDBLite consensus disorder prediction 1 35 - -
Viun11g02156 302 MobiDBLite consensus disorder prediction 199 225 - -
Viun11g02156 302 Pfam Myb-like DNA-binding domain 142 190 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02156 Viun-Chr11 36631361 36634062 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02156 1 222 G2-like Transcription Factor Family AT3G46640 61.475 1.16e-86 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Viun11g02156 Myb_DNA-binding 1.2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02156 - - aprc:113858844 486.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g02156 11 36631361 36634062 Viun11g02156 11 36631361 36634062 ECH