Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02144 ATGCTCTCCATGGATTCCCTTCTGGATAATTTTCCTGGTTCGGCAAATGGATTCATATTTGAAAACGGTTCTGTCTCGTTGTTTACGAATCAGAACAGGGTAAGTGAGTTCAAGTTGGATGATTCACCTGTCTCGGTGTTTACGAATCAGAACGGGGGAAGTGAATTCAAGTTGGATGATTCACGTTCCCCGTCAGAGTCTGCCGCCGATGATGCTCCCTCTTCTGGGACAAGCTCTGACGGAGAACACACAGAGAGTACTAAGCTCTCCAATCCCATGCTCAGGTACATAAGTGATATCCTCATGGAAGAAGAGGATGATTTGGAGCGCAAACCCTGCATGTTGCACGATTGTTTGAGACTCCAGGCTGCTGAAAAATCATTCTATGATGCTTTGGTTCATAGTCACCCATCATCACCTCGTCAATTTAACGATAACCCAGACCCAGATGATAATTTTGGTGGAACCACTAGTTCTGAGAGTTATAGCAGTTATACCACTGACAATTCATGCGAGTCTGATAGGTTTAACGGTGCTGGTGATTTTGATTCTTATTTGCTACAAAGATCGCTGCATAATTCTCAGGAACACGCTTATGTTGCTCCTGATCTGATTAGAGGGGCACAAGCTGAGTTCCATTTTTCAAATGGAGCCTGGAATTTGATTCAGTCGCAGAACAAGGCGGGCGTAACTGAAGAGAGTGTGACAAGGACAGGCAAAGGATCAAGGGAGAAGAGGAGCCATCTCATGAAAGATGATGTCTCACATGAAGAAGAGGAGAGAAGCAATAAGCTTTCAGCTGTCTATTCTGATGATTCGGAGTCATGTAGCATGTTCGATGAAGTGCTGTTTTGCAGTGATGGCAAGAGTCCAGCCATTTTGAAATCTGACCGTGAACCGTCATCATCACAGCTTGCTGATTCAGGAGGATCTAATGGGAAGACAACACGTTCGAAGAAAGGTCCCAACAAGGGAAAAAGTGCAAGAACAACGGTGGATTTATGGACTTTGCTAACTCAATGCGCACAAGCCGTGGCTAGCTTTGACCCAAGGACTGCAAATGAAATCCTCAAGCAGATTAGGCAGCACTCTTCACCTTCAGGCGATGGACTTCAGCGTTTGGCTCACTACTTTGCCGATGGTCTGGAGACAAGGTTAGCTGCAGGGACACCAAAGTTCATGCTGTTTCAGTCAGCATCTGCTGCAGATATGTTAAAAGCTTACAGAGTGTATGTCACATCATCACCATTTCACTGGATGTCATATTTCATGGCTAACCGCACTATTCTTAAGTTTACAAAAAGTGAAAGCAGTCTTCACATTATTGACTTTGGGATTAGCTATGGCTTCCAGTGGCCTTGCCTCATCCAACGGCTTTCACAGAGAGCAGGAGGTCCTCCGAGGCTTCGTATAACAGGAATCGATTTTCCTCAGTCAGGGTTTAGGCCAGCAGAAAGGGTAGAGGAGACGGGGCGGCGCCTAGAGAAGTACTGCAAGAGATTTGGAGTCCCTTTTGAGTACAATGGCCTTGCTCAGAAATGGGAAACCATAAGACTTGAGGACCTCAAACTTGATAGGAGTGAAGTAACTGTGGTTAACTGTTTGTACAGAATGAAGAACCTGTCGGATGAAACTGTGACTGCAGACTGTCCTAGAGATGCTGTGCTGAGGTTGATCAGGAGGATCAATCCAACCATCTTCATGCACGGGGTTGGCAATGGCACCTACAATGCACCATTCTTCTTGACAAGGTTCAGGGAAGCACTGTTCCACTTCTCAGCATTGTTTGATATGTTTGAAGCTAATGTGCCTCGGGAAGATCCATCTAGGCTTATGTTTGAGAAAGGGTTGTTTGGAAGGGACGCAATCAATGTCATAGCATGTGAGGGGGCAGAGAGGGTTGAAAGGCCAGAGACCTACAAGCAATGGCAGGTTAGGAACCAGAGAGCAAGGTTCAAGCAACTTCCATTGAGCACAGAGCTCGTGAACAGAGTAAAGGAAATGGTGAAGAAGGAATATCATAAAGATTTTACAGTTGATGAGGATGGGAAGTGGGTTTTGCAAGGATGGAAAGGGCGTATTCTTTTTGCTCTTTCTTGTTGGGTTCCTGCTTGA 2115 0.4558 MLSMDSLLDNFPGSANGFIFENGSVSLFTNQNRVSEFKLDDSPVSVFTNQNGGSEFKLDDSRSPSESAADDAPSSGTSSDGEHTESTKLSNPMLRYISDILMEEEDDLERKPCMLHDCLRLQAAEKSFYDALVHSHPSSPRQFNDNPDPDDNFGGTTSSESYSSYTTDNSCESDRFNGAGDFDSYLLQRSLHNSQEHAYVAPDLIRGAQAEFHFSNGAWNLIQSQNKAGVTEESVTRTGKGSREKRSHLMKDDVSHEEEERSNKLSAVYSDDSESCSMFDEVLFCSDGKSPAILKSDREPSSSQLADSGGSNGKTTRSKKGPNKGKSARTTVDLWTLLTQCAQAVASFDPRTANEILKQIRQHSSPSGDGLQRLAHYFADGLETRLAAGTPKFMLFQSASAADMLKAYRVYVTSSPFHWMSYFMANRTILKFTKSESSLHIIDFGISYGFQWPCLIQRLSQRAGGPPRLRITGIDFPQSGFRPAERVEETGRRLEKYCKRFGVPFEYNGLAQKWETIRLEDLKLDRSEVTVVNCLYRMKNLSDETVTADCPRDAVLRLIRRINPTIFMHGVGNGTYNAPFFLTRFREALFHFSALFDMFEANVPREDPSRLMFEKGLFGRDAINVIACEGAERVERPETYKQWQVRNQRARFKQLPLSTELVNRVKEMVKKEYHKDFTVDEDGKWVLQGWKGRILFALSCWVPA 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02144 704 MobiDBLite consensus disorder prediction 137 170 - -
Viun11g02144 704 MobiDBLite consensus disorder prediction 226 267 - -
Viun11g02144 704 ProSiteProfiles GRAS family profile. 325 702 IPR005202 -
Viun11g02144 704 MobiDBLite consensus disorder prediction 48 90 - -
Viun11g02144 704 MobiDBLite consensus disorder prediction 135 170 - -
Viun11g02144 704 MobiDBLite consensus disorder prediction 294 328 - -
Viun11g02144 704 MobiDBLite consensus disorder prediction 67 90 - -
Viun11g02144 704 Pfam GRAS domain family 336 701 IPR005202 -
Viun11g02144 704 MobiDBLite consensus disorder prediction 237 267 - -
Viun11g02144 704 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 260 696 IPR005202 -
Viun11g02144 704 MobiDBLite consensus disorder prediction 296 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02144 Viun-Chr11 36559535 36562272 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02144 245 704 GRAS Transcription Factor Family AT1G07530 56.103 0.0 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Viun11g02144 GRAS 1.2e-114 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02144 - - gmx:100815586 1072