Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02142 ATGGAGCCCAACTTTCCCGGAGTTGACCTGTTTGATGAAGAGGAGAACATATCACACCTCTCAGAATCACTTGGTTTTGCTAGAATGGATCCTCCACTTGAAGACAACGACTTCTCAGAAACCATCAAGTTCATAAGCCAGATCCTCATGGAAGAGAACGTTCAGCTACAGAATCCATTCTACGACTCACTCACCTTGCAGGTTACCGAGAAGTCCTTCTATGATACTCTAGTGGGTAACCTTTCCCCTAATCAACACGCCCTTCTTCTCAGCCCCCAAGGTGAAACCACCGCCACTGATAACAACAGTTTTTTAGATGAAATTTTCCCTTCCCCGGATTCTGTTTCTGCTTCTGCTTCTACTTTTCAGTCTGTTAGTCATGGATTCTCAGATTTAGATTCTTCTATTGCCAAACTCTTGGCACAGAATATGTTCAATGATGCTGATTCTATTTCCCAGTTCAGGAGAGGATTAGAGGAAGCTACCAAGTTTCTTCCTTCTGGCCCTGAGCTTGTAACTGGTCTCCATTTAAACGGTGAAGAACAAATCGAAACGTTTGAAGTTAATTCCAAGAGTAGAAAGAATCACGAGCGTCAAGAGAGAGATACCACAGAAGAAGAAGGGAGAAGTAGTAAGCAATCGGCACTTAGCCTTGTTGATGAGAGTGACATTTCAGATGCCATAGATCGGGTGTTTCTAAGTGTGGAAAACGTGGGCAGTGAACACGATTCCTTGCAGAGTGGAGCAGTGAAAGGTGAGGAGCGACATGGAGGAAAGTGCCGATCAAAGAAAAAAGGGACGAAGAAGGAAACTGTGGATTTGAGGAATCTTCTGCTGATGTGTGCACAATCTGTGTATGCCAATGACAATAGAGCTGCCACCGAATTACTAAAGCAAATTCGGCAACACTCTTCGCCCTTTGGTGATGCATCACAGAGGGTAGCTCACTACTTCGCCAATGGTCTTGATGCACGCTTGGTTGGGGCTGGTTCTTGCGGTCATGAACTATTTTCTTTTCGGAACTCTCAGAGGATTACTGCTGCAGAGTACCTGAAGGCATATCAAGTGTTTCTATCTTCCACCCCTTTCAAGAAGTTTACATATTTCTTTGCAAACAAAATGATTACGGAAGCAGCTGCAAAATCAGAAACTCTCCATATTATTGATTTTGGCATCCTATATGGTTTCCAGTGGCCAATTCTTATAAAGTTTTTATCAGATAGAGAGGGTGGTCCTCCCAAGTTGAGGATCACAGGGATAGAGTTTCCCCAACCAGGTTTTCGTCCCTCTGAAAGGATTGAGGAGACGGGTCACCGTCTTGCTAACTATTGTAAGCGTTACAAGGTTCCCTTTGAATACCATGCCATAGCATCAAGGAACTGGGAAACTATTCAGGTGGAAGCCCTTAAAATTGAGAGCAATGAGATAGTTGCTGTCAACTGTCACATGAGGTTTGAACATTTACTGGATGAGAGTACTGTTGAAGTGAACAGTCCTAGAAATGCAGTTCTTCATTTGATCAGGAAGATAAATCCGGATATCTTTACTCAGATCATTATTAATGGATCATACAGTTCCCCTTTCTTTACCACACGGTTTAAGGAGGCACTGTTCCATTTTTCTGCGGTTTATGATCTGTTTGACACTGTCATACCTCGTGAAAACGATTGGAGGTTGACGATTGAGAGAGAGCTTTTGGGTCGGGAGGCTATGAATGTCATTGCATGTGAAGGTTCTGACAGGGTTCATAGACCTGAGACATACAAACAATGGCAAGTTAGGAATACAAGGGCTGGTTTCAAGCAGCTCTCATTGAAGGAGGAATTGATGGCCAAACTTAGGACTAAGTTAAAGGAATATCACAGGGATTTTGTCTTCAATGAAGATAACAATTGGATGATTCAAGGTTGGAAGGGCCGAATTTTTAATGCTTCCACTTGTTGGGTGCCCACATAA 1956 0.4315 MEPNFPGVDLFDEEENISHLSESLGFARMDPPLEDNDFSETIKFISQILMEENVQLQNPFYDSLTLQVTEKSFYDTLVGNLSPNQHALLLSPQGETTATDNNSFLDEIFPSPDSVSASASTFQSVSHGFSDLDSSIAKLLAQNMFNDADSISQFRRGLEEATKFLPSGPELVTGLHLNGEEQIETFEVNSKSRKNHERQERDTTEEEGRSSKQSALSLVDESDISDAIDRVFLSVENVGSEHDSLQSGAVKGEERHGGKCRSKKKGTKKETVDLRNLLLMCAQSVYANDNRAATELLKQIRQHSSPFGDASQRVAHYFANGLDARLVGAGSCGHELFSFRNSQRITAAEYLKAYQVFLSSTPFKKFTYFFANKMITEAAAKSETLHIIDFGILYGFQWPILIKFLSDREGGPPKLRITGIEFPQPGFRPSERIEETGHRLANYCKRYKVPFEYHAIASRNWETIQVEALKIESNEIVAVNCHMRFEHLLDESTVEVNSPRNAVLHLIRKINPDIFTQIIINGSYSSPFFTTRFKEALFHFSAVYDLFDTVIPRENDWRLTIERELLGREAMNVIACEGSDRVHRPETYKQWQVRNTRAGFKQLSLKEELMAKLRTKLKEYHRDFVFNEDNNWMIQGWKGRIFNASTCWVPT 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02142 651 MobiDBLite consensus disorder prediction 185 218 - -
Viun11g02142 651 MobiDBLite consensus disorder prediction 243 267 - -
Viun11g02142 651 Pfam GRAS domain family 274 648 IPR005202 -
Viun11g02142 651 ProSiteProfiles GRAS family profile. 265 649 IPR005202 -
Viun11g02142 651 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 209 638 IPR005202 -
Viun11g02142 651 MobiDBLite consensus disorder prediction 247 267 - -
Viun11g02142 651 Coils Coil 603 623 - -
Viun11g02142 651 MobiDBLite consensus disorder prediction 186 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02142 Viun-Chr11 36548483 36551772 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02142 41 651 GRAS Transcription Factor Family AT1G07530 43.786 1.75e-180 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Viun11g02142 GRAS 9.4e-112 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02142 - - gmx:100795855 929.472