Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02141 ATGGAGCACCCAAACTTCTTCGGTGGTGAAGAAGAAGAAGATGGCATGACCCATCTCACAGACCCGCTTGCTTTTCCGACCATGGATCCTTCTTCCAGAGACCCCTCGCTGGAAGATAACGACTTCTCAGAAACTGCAAAGTTCATCAGCCAGATCCTCATGGAAGAGAACGTCGAACACAAGCCATTCTACGACTCACTCACCTTGCAAGTTACGGAGAAATCTTTCTACGACGCTCTCGCCGGTAACCTACCTCCTTCCCCCAATCAACACCCCCTTGCTTTCAGTCCCGAAGCTGAAACCACCACCACCACTACCACCGCCAGCACCAGCACCAGCAGCAACAGCAGTAACAACAATTTTTCGGATGAAAATTCAAGTGAGTTGAAGCTTCCTTCTCCAGATTCTGTTTTTAAGTTTAACTCCCGCGCCCTTTCTCAGCCGTCTCCGTCCATTACCGCCAACCATGGACTCCAAGATTTGGATTTTTCTATTGCCAAACTCTTATCACAGAATATTTTCAACGATGTTGACTCCGTTTCCCAGTTCAGGCGGGGCCTGGAGGAAGCTAGCAAGTTTCTTCCTCCGGGACCTAACCTTGTGACTGGTCTAGGTTCAAACGGAGAACAAGCGTTGAATAAGTTTGTAGATACTTCGTATGGGTTGAGTGGGAAAAATCACAAGAGGGACGAGAGATACGCTATAGAGGAAGAAGAAGAAGAAGAAGGGAGAAGTAACAAGCAGACAGCACTTTCCCATGCCGATGAGAGTGATTTGTCAGATGCTTTCGATCGGGTGTTGCTTCATGAGGGAAACATGTGTAGCCAAATCAGTTCTTTGCCAGGTGGAGCAGTGAAGGTCGATGAAGCAGATGGAGGGAAGAGTCGTTCGAGGAGAAAAGGGAGGAACAAGGAAACAGTTGATTTGAGGAATCTTTTGTTGATGTGCTCACAATCTGTGTATGCCAATGACAACAGAACGGCCAATGAATTGCTGAAGCAGATTAGGCAACACTCTTCTCCCTTTGGAGATGCATCACAGAGGTTGGCTCATTACTTTGCCAATGGTCTTGAGGCACGCTTGGTTGGGGATGGTACAGTTGCACAGGGAATGTATTCTTTTCTGACCTCTAAGAGGAGTTCTGCAGCAGAGTTTCTCAAGGCATACCAGGTTTTCCTTTCCGCTTCCCCTTACAAGAAGTTTATATATTTCTTTGCGAATAAAATGATTATGAAAGCAGCTGCAAAGGCAGAAACCATCCATATTATTGATTTTGGCATCCTATATGGTTTCCACTGGCCAATTCTTATAAAGTTTTTATCAGATAGAGAGGGTGGTCCTCCCAAACTGAGGATCACAGGGATAGAGTTTCCCCAACCAGGCTTTCGTCCCTCTGAAAGGATTGAGGAGACGGGTCACCGTCTTTCTAACTATTGTAAGCGTTACAAGGTTCCCTTTGAATACCATGCCATAGCATCAAGGAACTGGGACACAATTCAGGTTGAAGCCCTTAAAATTGAGAGCAATGAGTTTGTTGCTGTCAATTGTCATATGAGGTTTGAGAATTTACTGGATGAGTCTATTGAAGTGGACAGTCCTAGAAATGCAGTCTTGCATTTGATCAGGAAGATAAATCCAGATATATTTACTCACTCCATCACTAATGGATCATACAATGCCCCCTTCTTTGCCACAAGGTTTAGGGAGGCTTTGTTTCATTATTCTGCTATTTATGATATGTGTGACACTGTCATACCTCGAGAAAACGAATGGAGGTTGATGATTGAGAGAGAGTTTTTGGGCCGGGAGGCTGTGAATGTTATAGCATGCGAAGGTTCTGAGAGACTTGAGAGGCCTGAGACATACAAACAGTGGCAGGCTAGGAATACAAGGGCTGGCTTCAAGCAGCTCCCATTGAATCCGGAATTGATGACCAAGTTTAGGACCAAGTTAAAGGAATGGTACCACAGAGATTTTGTCTTTGATGAAGATAACAATTGGATGCTTCAAGGTTGGAAGGGCCGCATTCTGTATGCTTCCACTTGTTGGGTGCCGGCATAA 2061 0.4537 MEHPNFFGGEEEEDGMTHLTDPLAFPTMDPSSRDPSLEDNDFSETAKFISQILMEENVEHKPFYDSLTLQVTEKSFYDALAGNLPPSPNQHPLAFSPEAETTTTTTTASTSTSSNSSNNNFSDENSSELKLPSPDSVFKFNSRALSQPSPSITANHGLQDLDFSIAKLLSQNIFNDVDSVSQFRRGLEEASKFLPPGPNLVTGLGSNGEQALNKFVDTSYGLSGKNHKRDERYAIEEEEEEEGRSNKQTALSHADESDLSDAFDRVLLHEGNMCSQISSLPGGAVKVDEADGGKSRSRRKGRNKETVDLRNLLLMCSQSVYANDNRTANELLKQIRQHSSPFGDASQRLAHYFANGLEARLVGDGTVAQGMYSFLTSKRSSAAEFLKAYQVFLSASPYKKFIYFFANKMIMKAAAKAETIHIIDFGILYGFHWPILIKFLSDREGGPPKLRITGIEFPQPGFRPSERIEETGHRLSNYCKRYKVPFEYHAIASRNWDTIQVEALKIESNEFVAVNCHMRFENLLDESIEVDSPRNAVLHLIRKINPDIFTHSITNGSYNAPFFATRFREALFHYSAIYDMCDTVIPRENEWRLMIEREFLGREAVNVIACEGSERLERPETYKQWQARNTRAGFKQLPLNPELMTKFRTKLKEWYHRDFVFDEDNNWMLQGWKGRILYASTCWVPA 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02141 686 MobiDBLite consensus disorder prediction 220 257 - -
Viun11g02141 686 MobiDBLite consensus disorder prediction 94 132 - -
Viun11g02141 686 MobiDBLite consensus disorder prediction 223 251 - -
Viun11g02141 686 MobiDBLite consensus disorder prediction 284 303 - -
Viun11g02141 686 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 238 679 IPR005202 -
Viun11g02141 686 ProSiteProfiles GRAS family profile. 300 684 IPR005202 -
Viun11g02141 686 MobiDBLite consensus disorder prediction 1 18 - -
Viun11g02141 686 Pfam GRAS domain family 309 683 IPR005202 -
Viun11g02141 686 MobiDBLite consensus disorder prediction 289 303 - -
Viun11g02141 686 MobiDBLite consensus disorder prediction 82 133 - -
Viun11g02141 686 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02141 Viun-Chr11 36542695 36545642 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02141 47 686 GRAS Transcription Factor Family AT1G07530 48.571 0.0 598
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Viun11g02141 GRAS 2.9e-115 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02141 - - gmx:100795855 1013.06